| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1016 |
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| Symbol | |
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| ID | 4686060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1073857 |
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| End bp | 1074945 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834015 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_981254 |
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| Protein GI | 121603925 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0586204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTT ACAAGATTGC CTGCATCCCG GGCGACGGCA TTGGCAAGGA AGTGGTGCCT
GCGGGCCAGG CAGTGCTTGA AGCGCTGGGC GCTGTCAGCC GCTTTAAATT TGATTTCGAG
AATTTCGGCT GGGGCGGCGA CTGGTTCCGG GCGCACGGCG AAATGATGCC GCAGGACGGC
CTGGACGCAC TGCGCGGCAA GGACGCGATT TTGTTCGGCT CGGCGGGCGA CCCGCATATT
CCCGACCACA TCACGCTGTG GGGCCTGCGC CTGAAGATCT GCCAGGGCTT CGACCAGTAC
GCCAACGTGC GCCCGACCCG CATCCTGCCG GGCATCGACG GGCCGCTCAA GCGCTGCACG
CCCGAGCAGC TGGACTGGGT CATCGTGCGC GAGAACTCCG AGGGTGAATA CTCCGGCGTC
GGTGGCCGCG TCCACCAGGG CCATCCCATC GAGGCGGCGA CCGACCTGTC GATGATGACG
CGCGCCGGCG TCGAGCGCAT CATGCGCTTT GCCTTCAAGC TGGCGCAATC GCGCCCCCGC
AAGCTGCTGA CCGTCGTCAC CAAATCCAAC GCCCAGCGCC ACGCGATGGT GATGTGGGAC
GAAATCGCCG TGGAGATCGC CAAGGAATTC CCCGACGTGA CCTGGGACAA GGAACTGGTC
GATGCCTGCA CCGCGCGCAT GGTGAACCGC CCCGCAACGC TGGACACGCT GGTGGCCACC
AACCTGCATG CCGACATCCT GAGCGACCTG GCCGCCGCGC TGGCCGGCAG CCTGGGCATT
GCGCCCACCG GCAACATCGA CCCCGAGCGC CGCTACCCGA GCATGTTCGA ACCGATTCAC
GGCTCGGCCT TCGACATCAT GGGCAAGGGC CTGGCCAACC CGGTCGGCAC GTTCTGGAGC
TGCGTGATGC TGCTGGAGCA CCTGGGCGAA GCCGAAGCGG CCCAGACCCT GATGGCCATC
ATCGAGCAGG TCACCGCCGA CCCGCTACTC CACACCGGCG ACCTCGGCGG CAAGGCCACG
ACGCAGCAGG TGACGCAGGC GGTGTGCGAA CGCATCACCG GCGCCCTGGC GCAACGCAAG
GCGGCCTGA
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| Protein sequence | MKTYKIACIP GDGIGKEVVP AGQAVLEALG AVSRFKFDFE NFGWGGDWFR AHGEMMPQDG
LDALRGKDAI LFGSAGDPHI PDHITLWGLR LKICQGFDQY ANVRPTRILP GIDGPLKRCT
PEQLDWVIVR ENSEGEYSGV GGRVHQGHPI EAATDLSMMT RAGVERIMRF AFKLAQSRPR
KLLTVVTKSN AQRHAMVMWD EIAVEIAKEF PDVTWDKELV DACTARMVNR PATLDTLVAT
NLHADILSDL AAALAGSLGI APTGNIDPER RYPSMFEPIH GSAFDIMGKG LANPVGTFWS
CVMLLEHLGE AEAAQTLMAI IEQVTADPLL HTGDLGGKAT TQQVTQAVCE RITGALAQRK
AA
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