| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1013 |
|---|
| Symbol | |
|---|
| ID | 4686682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1070453 |
|---|
| End bp | 1071436 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639834012 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981251 |
|---|
| Protein GI | 121603922 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
|---|
| TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.102248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCAAG GCACGCCCAA GGCCCGGTGT GGCATGTGTC ATGCTGCGGT TGGCGATGGC
TTGGTTCTCT TTTGCCAGCA TCGATTATTT TGCTCACTAT TGCGCCATTC ACGCCATTTA
TTGTGTATGC AAATGCCCAT GATTTTTACC AGCGCCAGCC GCTTCACTTC GCATTTTCTT
GGCCGGCTGG CGCGCCAGCC GGCCGTGCTG GTGCAGGTCA CATCGACCCA GGGATCGGTG
CCGCGCGAGG CCGGAGTCTG GATGGCTGTT TTTGACGATG CCGTGGTGGG CACGATTGGC
GGCGGCCATC TTGAATACCA GGCGATTGCC AGGGCACGCG CCATGCTGGG CGCCAGGCCG
GCAGCGCAGC AGGCCGCGCA GCCGGCAAGC GACGGGCGTT TTGCGCTCGG CCCGGCGCTC
GGCCAGTGCT GCGGCGGCGT GATGCACCTG CGCTTCGAAC TCGTCGTCGC AGGCGATAGT
CCGTCGCTGG CCGTGCGGCT GGGCGGCGAT CTGGCGCCGG TGGCGCTTTT CGGCGGCGGC
CATGTGGGCC ATGCGCTGGT GCAGGTGCTC GCGCCCCTGC CGTTTTGCAC CACCTGGATC
GACAGCCGCG AGCAAGTGTT TCCGGCCAGC GTGCCCGAGC GCGTGGTGTG CGAGCATTCC
GAGCCGGTCC AGGGGGCCGT TGCCGGCCTG GCGCCGCAAT CGCGCGTGCT CATCATGAGC
TTCAGCCATG CCGAAGACCT GGAGGTGGTT GCGGCCTGCC TCAGGCGCCA GCGCGAACAA
GCCGATTTGC CGTATGTCGG TCTGATTGGC AGCAAGACCA AATGGGCTAC GTTCCAGCGC
CGCCTGGAGG CGCGCGGCTT CAGTCCTGCC GAACTGGCGC ACGTCACCTG TCCCATCGGC
ATTGCGGGCA TCAGCGGCAA GGAGCCCGAG GTGATTGCCG TGGCGGTGGC CGCCCAGCTG
TTGCAAACCC TCGGCCCGTC TTGA
|
|---|
| Protein sequence | MGQGTPKARC GMCHAAVGDG LVLFCQHRLF CSLLRHSRHL LCMQMPMIFT SASRFTSHFL
GRLARQPAVL VQVTSTQGSV PREAGVWMAV FDDAVVGTIG GGHLEYQAIA RARAMLGARP
AAQQAAQPAS DGRFALGPAL GQCCGGVMHL RFELVVAGDS PSLAVRLGGD LAPVALFGGG
HVGHALVQVL APLPFCTTWI DSREQVFPAS VPERVVCEHS EPVQGAVAGL APQSRVLIMS
FSHAEDLEVV AACLRRQREQ ADLPYVGLIG SKTKWATFQR RLEARGFSPA ELAHVTCPIG
IAGISGKEPE VIAVAVAAQL LQTLGPS
|
|---|
| |