Gene Pnap_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1011 
Symbol 
ID4686347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1068704 
End bp1069891 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID639834010 
Producthypothetical protein 
Protein accessionYP_981249 
Protein GI121603920 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.630289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.164657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCG ATTGCCGGTT TTTCAGTTTA AACCGGCTCG GGGACACGCT GGTTCAGGCG 
GTTGTCCCGT CGCGGCAGAG GGGCTGCAAG CCGTGCCGTC CTGTCATGGC GCAGTCATGC
GTCAACATGA CAATCGCTGA TTCGCCACTT TTTTGCTCCA CCATGAACGA CCATTCAAAG
CGCGCCCTGA GCCGCCGCCA GGCCCTGGCG CTGTTTGCAG GCGCTGGCGC CAGCCTGGCG
ATGCCGGCCG CGATGGCGCA AGGGCCGTCC ACGAATCCAG CCGCTTATTC CGCTTACCCG
GAGCGGGCCG TCAGGATCGT CGTGCCTTTC GCCCCCGGAG CGGGGACCGA TGCGATGGCG
CGGCTGGTGG CGCAAAAGCT CGGCGAGGTC ATGAACGCGA CGTTTGTCGT GGACAACCGC
GCAGGCGCCT CTGGAGCCAT TGGCACGCAA TACGTGGCGC AGGCGCCGGC CGACGGCTAT
ACCCTGCTGC TGGCGGCATC GCCCTTCACC ACCGTGGCGG CATCGGTGCC CGGCGCCCAC
TACGATCCGC TGCGCCAGTT CACGCCGGTC GGCATGATTG CCACCGGGCC GCTGGTCTGG
GCGGCCAACA CCTCGCTGCC GGTCAACAGC ATGAAGGAGC TGATCACGCT GGCCCGGCAA
AAACCCGGCG TGCTCAATTA CGGCTCGGCC GGCGCCGGCG GCGTGAACCA CCTGGTGCTG
GAGCTGCTGA AGGCGCGCAC CGGCACCTTC ATCACGCACA TCCCTTACCG GGGCGTGGCG
CCCGCGACCA TGGACATGAT CGGCGGGCAG ATCCAGCTGG TCACCGGCAC CATTCCGGCC
TTGCTGCCAT TCATCAGGAG TGGCAGCATC AAGCCGCTGG CGGTGACCAG CGCCAAACGC
TCCAGCGCCC TGCCTGACGT GCCCAGCATG CTTGAAGCCG GCCTGGCGGG GATTGATGTG
GTGAACTACT TTGCCCTGAT GGCGCCCGCC GGCACGCCCG CGGCCATCGT CAACCGCCTG
AATGCGGCCA TCAACAAGGT CGTGGCCCTG CCCGAGGTGC TGGCCCGCTT CAAGGCGGAC
GCCGTGGAAG CTGCACCGGG CTCGCCCGCG CTGCTCGGCC ACTTCATCGA GGCCGATTAC
CGCGCCTGGC GCAACGTCGT GAAAACCCAG AACCTGAAGA TTGAATAG
 
Protein sequence
MPGDCRFFSL NRLGDTLVQA VVPSRQRGCK PCRPVMAQSC VNMTIADSPL FCSTMNDHSK 
RALSRRQALA LFAGAGASLA MPAAMAQGPS TNPAAYSAYP ERAVRIVVPF APGAGTDAMA
RLVAQKLGEV MNATFVVDNR AGASGAIGTQ YVAQAPADGY TLLLAASPFT TVAASVPGAH
YDPLRQFTPV GMIATGPLVW AANTSLPVNS MKELITLARQ KPGVLNYGSA GAGGVNHLVL
ELLKARTGTF ITHIPYRGVA PATMDMIGGQ IQLVTGTIPA LLPFIRSGSI KPLAVTSAKR
SSALPDVPSM LEAGLAGIDV VNYFALMAPA GTPAAIVNRL NAAINKVVAL PEVLARFKAD
AVEAAPGSPA LLGHFIEADY RAWRNVVKTQ NLKIE