| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0999 |
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| Symbol | |
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| ID | 4687004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1052571 |
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| End bp | 1053782 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833998 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_981237 |
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| Protein GI | 121603908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CTTTCCCCAC CATCAATGAT TCCTTGCTTG CGGAGCAGGG CACCGATCTG
GCGCCTAAAG TGCCGGCTCA GGCCCGCCCG CCAGCGCCAT CCAGCCCGGG GCGCGTCGAG
CTTCCCGGCA AAGGCCCGCT GCTGACCCGC AGCGGCTGGA GCGCCTTTGT CATCGCGCTG
ATCGTGGTCT GCGCCGTGGC GCCGGTGCTC AATCTCTGGG TGCCCGAGGG CCATGCGCTG
CACCTGAGCA CTTACGCCGT CGCGCTGCTG GGCAAGATCA TGTGCTACGC GATTTGCGCG
CTGGCCATGG ACTTGATCTG GGGCTACACC GGCATCCTGT CGCTGGGCCA CGGCGTGTTT
TTTGCGCTTG GCGGCTACAC CATGGGCATG TACCTGATGC GCCAGATCGG CGCTGACGGC
AACTACAAAA GCAATTTGCC CGACTTCATG GTCTTCCTCG ACTGGAAGGA GCTGCCCTGG
CACTGGACCT TCAGCGACAG CTTTGTCGCC ACCCTGATCC TGATCGTCGC GGTGCCGGGT
ATCGTGGCCT TTGTGTTCGG CTACTTTGCC TTTCGCTCGC GCATCAAGGG CGTGTACTTT
TCGATCATCA CGCAGGCCAT GACCTTTGCC GCGATGCTGC TGTTTTTCCG CAACGAGACC
GGCTTTGGCG GCAACAACGG CTTTACCGAC TTCAAGCGCA TCCTGGACAT CCCGATTGCC
ACGCCGTCGA TGCGCATGAC GCTGTTTGTC ATGACCGGGC TGACGCTGCT GGGCTTCTTC
CTGTTCGCCA AATGGCTGGT CGGCAGCAAG TTCGGCCGCG TGCTGCAGGC GATCCGCGAT
GCGGAAACGC GCGTCATGTT CTCGGGCTAC AGCCCGCTGG GCTACAAGCT GACGATCTGG
GTGATCTCGG CCGTCATGTG CGGCGTGGCC GGTGCGCTGT ATGTGCCGCA GGTCGGCATC
ATCAACCCCG GCGAGATGAG TCCGGCCAAT TCGATTGAAA TCGCCATCTG GGCAGCGGTT
GGCGGCCGCG CCAGCCTGAT CGGGCCGATA GTCGGCGCCT TCATCGTCAA CGGCGCCAAG
AGCTGGCTGA CGGTTGCTTA CCCCGAGTTC TGGCTGTATT TTCTGGGCGC GCTGTTCATT
GGCGTCACGC TGTTCTTGCC CAATGGTGTT GTCGGGCTGG TGAAAAAACT GCGCAAGGGA
GCTGAACAAT GA
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| Protein sequence | MSTPFPTIND SLLAEQGTDL APKVPAQARP PAPSSPGRVE LPGKGPLLTR SGWSAFVIAL
IVVCAVAPVL NLWVPEGHAL HLSTYAVALL GKIMCYAICA LAMDLIWGYT GILSLGHGVF
FALGGYTMGM YLMRQIGADG NYKSNLPDFM VFLDWKELPW HWTFSDSFVA TLILIVAVPG
IVAFVFGYFA FRSRIKGVYF SIITQAMTFA AMLLFFRNET GFGGNNGFTD FKRILDIPIA
TPSMRMTLFV MTGLTLLGFF LFAKWLVGSK FGRVLQAIRD AETRVMFSGY SPLGYKLTIW
VISAVMCGVA GALYVPQVGI INPGEMSPAN SIEIAIWAAV GGRASLIGPI VGAFIVNGAK
SWLTVAYPEF WLYFLGALFI GVTLFLPNGV VGLVKKLRKG AEQ
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