| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0998 |
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| Symbol | |
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| ID | 4686763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1050993 |
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| End bp | 1052567 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833997 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_981236 |
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| Protein GI | 121603907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTC GACACCTCCT TTTCTATGCT ACGCTTTTCA TAGCTGCTCA TGCCCATGCC
TTAAGCGCAG ACGAGGTAAA AGGCATTATT TTTGGCGAAA CCGACACGCG TGTCGAGGCG
CTGAACAAGG CGGCGCTCAC GGCCGATGAA AAAACCGTCG CCTTCATCCA GGCGCTGTCC
GACGACGCCG TCAAGACCAG CGGCGACAAG GTCTTCGTGG TCAAGGACGA CAAGGCCTTC
GACCCGGTCA CCGGCGCCGA GCAGCCCCTG CCGCAAGACG CCGAAGACGT GATCAACCCC
AACATGATGC GCAGCGAACT CGACAACGCG CTGGCCGCGC TCAAGCTCCT GTCCAAGGAC
GAACAGCTGC GCCGCGAAGC CATCAAGACG CTGGGCAGCG ACAGCGACGA GGCCCGGCTG
CCGCTGATTG AAAAAGCCTG GGCGGCTGAG ACCGTGCCCG CGCTGAAGGA CCAGCTGGAG
ATGATGCGCG CCGCCATCCT GCTCGGCAGC AGCGACAGGG CCAAGCGCCT CGAAGCGGCC
GGCCTGCTGT CGGCCAGCAA GAATCCCGCG ACCAAAACCG TGCTGATCGA GCGCCTGGGC
ACCGAGCTGG ATGCCGATGT GAAGGTCGCG CTGCAGGCGG CGCTGGCCAA GGTCGAGGCC
TCGCTCGCCT GGGGCGACAA GCTGGGCGCG ATTTTCAGTG GCATCAGCCT GGGCAGCATC
CTGCTGTTGG TGGCACTCGG CCTGGCCATC ACCTACGGGC TGATGGGCGT CATCAACATG
GCGCACGGCG AGCTGATGAT GATCGGCGCC TACGCGACTT ATGTAGTGCA GGGCCTGTTC
CAGAAATACC TGCCCGGCGC GTTTGACTGG TATTTGCTGG CCGCCGTGCC GGTGGCTTTT
CTGGCGTCGG CCTTGATGGG CGCGGTGCTG GAGCGCAGCG TGATCCGCTT CCTCTATGGC
CGGCCGCTGG AGACGCTGCT CGCCACCTGG GGTATCAGCC TGATGCTGCA GCAACTGGTG
CGCTCGATTT TTGGCGCGCA AAACGTCGGC GTTGAAAACC CGGTCTGGAT GAGCGGCGGC
GTGCAGGTGC TGGGCAACCT GTCGCTGCCC TACAACCGGC TCGTCATCAT CGGCTTTGCG
ATTGCCGTGC TGCTGGGCAT GGGCTGGCTG ATCGGCAGGA CGCGGCTGGG CCTGTTCGTG
CGCGGCGTGA CGCAAAACCG CCCGATTGCC TCGTGCATGG GCGTGAACAC GGCGCGCATC
GACACCTATG CGTTCGCGCT CGGTTCGGGC ATTGCCGGGC TGGCGGGCTG CGCGCTGAGC
CAGGTCGGCA ACGTCGGGCC GGACCTGGGG CAGGGCTACA TCGTCGATGC CTTCATGGTC
GTGGTGCTGG GCGGCGTGGG TCAGCTGGCC GGCACGGTGT ACGCCGCCAT GGGGCTGGGC
ATCCTGAACA AATTCCTCGA AGGCTGGACC GGCGCCGTGC TGGCCAAGAT CGCCGTGCTG
GTGATCATCA TCATCTTCAT CCAGAAGCGG CCCCAGGGCA TCTTCGCGAT GAAGGGCCGT
TCGGCAGAGG CATAA
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| Protein sequence | MRLRHLLFYA TLFIAAHAHA LSADEVKGII FGETDTRVEA LNKAALTADE KTVAFIQALS
DDAVKTSGDK VFVVKDDKAF DPVTGAEQPL PQDAEDVINP NMMRSELDNA LAALKLLSKD
EQLRREAIKT LGSDSDEARL PLIEKAWAAE TVPALKDQLE MMRAAILLGS SDRAKRLEAA
GLLSASKNPA TKTVLIERLG TELDADVKVA LQAALAKVEA SLAWGDKLGA IFSGISLGSI
LLLVALGLAI TYGLMGVINM AHGELMMIGA YATYVVQGLF QKYLPGAFDW YLLAAVPVAF
LASALMGAVL ERSVIRFLYG RPLETLLATW GISLMLQQLV RSIFGAQNVG VENPVWMSGG
VQVLGNLSLP YNRLVIIGFA IAVLLGMGWL IGRTRLGLFV RGVTQNRPIA SCMGVNTARI
DTYAFALGSG IAGLAGCALS QVGNVGPDLG QGYIVDAFMV VVLGGVGQLA GTVYAAMGLG
ILNKFLEGWT GAVLAKIAVL VIIIIFIQKR PQGIFAMKGR SAEA
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