| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0997 |
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| Symbol | |
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| ID | 4687325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1049613 |
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| End bp | 1050896 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833996 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_981235 |
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| Protein GI | 121603906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTC GATTCACCCT CAAGGCGCTC ACCGCCGCCG TCGCCCTGAC CACCCTGTCC
GCGCTGCCCG CGTATGCGGC CGAAGACACC ATCAAGGTCG GCATCCTGCA CAGCCTGTCG
GGCACCATGG CGATTTCCGA GACCGTGCTG AAAGACACCG TCTTGATGGC GATTGACGAG
ATCAATGCCA AGGGCGGCGT GATGGGCAAG AAGCTCGAAC CCGTCGTCGT CGATCCGGCC
TCTAACTGGC CGCTGTTCGC CGAAAAGACC AAGCAGCTGC TCGGCCAGGA CAAGGTTTCC
GTCATCTTCG GCTGCTGGAC TTCGGTGTCG CGCAAGTCGG TGCTGCCGGT GGTCGAGGAA
ATGAACGGCC TGCTGTTCTA CCCGGTGCAG TACGAGGGTG AAGAGCTGAG CAAGAACGTG
TTCTACACCG GCGCGGCGCC GAACCAGCAG GCGATTCCTG CCGTCGATTA TTTGATGAGC
AAGGCCGGCG GTGGCGCCAA GCGCTGGGTG CTGCTGGGCA CTGACTACGT GTACCCGCGC
ACCACCAACA AAATCCTGCG CGCCTACCTC AAATCGAAGG GCGTGGCCGA CAAGGACATC
GACGAAAAAT ACACGCCGTT CGGCCATTCG GACTACCAGA CCATCGTGGC CGACGTGAAG
AAGTTCTCGC AGGGCGGCAA GACGGCGGTG GTCTCGACCA TCAACGGCGA CTCGAACGTG
CCTTTCTACA AGGAACTGGG CAATGCCGGC CTGAAGGCCA AGGACGTGCC GGTCGTGGCG
TTCAGCGTGG GTGAAGAGGA ACTGCGCGGC GTGGACACGA AACCGCTGGT CGGCCACCTG
GCTGCCTGGA ACTACTTCAT GTCGATCAAG AATCCGACCA ACACCGAGTT CATCAAGAAG
TGGAGCGACT ACGCCAAGGC CAAGGGCATC GCCGGCCACA AGGACAAGCC GCTGACCAAC
GACCCGATGG AAGCGACCTA TATCGGCATC AACATGTGGA AGCAGGCGGT TGAAAAAGCC
AAATCGACCG ACACCGACAA GGTGATTGCC GCCATGGCCG GCCAGACCTT CAAGGCGCCG
TCGGGCATCC TGTCGAAGAT GGACGAGAAG AACCACCACC TGCACAAGTC GGTGTTCATC
GGCGAGATCA AGGCCGACGG CCAGTTCAAC GTGGTCTGGA AGACGCCCGG CCCGGTGAAA
GCCAAGCCAT GGAGCCCGTA CATCGAAGGC AATGCGTCCA AGCCTGACGA GCCGGTCAAG
GGCATGAGCG TCGTCAAGAA GTAA
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| Protein sequence | MQRRFTLKAL TAAVALTTLS ALPAYAAEDT IKVGILHSLS GTMAISETVL KDTVLMAIDE
INAKGGVMGK KLEPVVVDPA SNWPLFAEKT KQLLGQDKVS VIFGCWTSVS RKSVLPVVEE
MNGLLFYPVQ YEGEELSKNV FYTGAAPNQQ AIPAVDYLMS KAGGGAKRWV LLGTDYVYPR
TTNKILRAYL KSKGVADKDI DEKYTPFGHS DYQTIVADVK KFSQGGKTAV VSTINGDSNV
PFYKELGNAG LKAKDVPVVA FSVGEEELRG VDTKPLVGHL AAWNYFMSIK NPTNTEFIKK
WSDYAKAKGI AGHKDKPLTN DPMEATYIGI NMWKQAVEKA KSTDTDKVIA AMAGQTFKAP
SGILSKMDEK NHHLHKSVFI GEIKADGQFN VVWKTPGPVK AKPWSPYIEG NASKPDEPVK
GMSVVKK
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