Gene Pnap_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0993 
Symbol 
ID4687536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1043932 
End bp1045011 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID639833992 
Producthypothetical protein 
Protein accessionYP_981231 
Protein GI121603902 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC TCGACAAAGT ACCACCCGCC GAGCCTGAAG CCGTCGCGCT CGGGCCTTTG 
CTGGGCCGCT TGCGCGAACT GATCGCGCAG GCGCGCACGC AGGCGCTGCG TGCGGTGGAT
GCGATCCAGG TTCATACCTG CTGGGAAATT GGTCGCTATA TCGTGGAGTT TGAGCAGCAG
GGGCAGGCGC GCGCAACGTA TGGCGCACGC CTGTTGCCGC AACTGGCCGG GCGCTTGACG
CAAGAGTTTG GCCGGGGCTT TGACGCCAGC AATTTGCGCA ATATGCGGAC GTTCTACCAG
GCGTTCCCAA TTCGTGACGC ACTGCGTCAC GAATTGAGCT GGACACACTA CCGGCGACTA
TTGCGGGTCG AAAGCGAAGC TGCCCGCCAG TGGTACGTGA GCGAAGCGGT CCGCCAGAAC
TGGAGTTCCC GCGCGCTGGA GCGGCAGATC GGCACGCTGT ATTACGAGCG CCTGCTGGCC
AGCCAGGACA AGGCCGCCGT GGCGGCGGAA GCCAGCGCCT TGCTGGCGCC GCTGAGCCAG
ACACCGCGCG AATTTGTCCG CGACTCGGTG CTGCTGGAGT TTCTGGGCCT GCCGGGTACC
GGGCGTTTGC TCGAATCCGA TCTGGAACAG GGCTTGATGG ACAAGCTGCA GGCGTTTTTA
CTGGAACTGG GCAAAGGCTT TGCATTCGTG GCGCGGCAGC AGCGCATCAG CACCGAGAGC
AAGGACTTCT ACATCGACCT GGTGTTCTAC AACTATTTGC TCAAGTGCTT TGTGCTGTTT
GACCTGAAAA CGGGTGAGCT GGCCCATCAG GACATTGGCC AGATGGACAT GTATGTGCGC
ATGTACGACG AGCTGAAAAC CGGGCCGGAC GACAACCCCA CGGTGGGCAT TATTTTGTGT
TCGCAAAAAG ATGCTTCGGT GGTGCGCTAT TCGGTGCTGA ATGGCAGCGA ACAGCTGTTT
GCCAGCCGCT ACAAACTGGT GCTTCCGTCA GAGGAGGAAT TGCGGCGGGA GCTGGACCGG
GAACGGGCTA GTTTGATGGG GCAGGTGGAG GCGGATGGCC CTGCCGATGC GGGCGGTTGA
 
Protein sequence
MTNLDKVPPA EPEAVALGPL LGRLRELIAQ ARTQALRAVD AIQVHTCWEI GRYIVEFEQQ 
GQARATYGAR LLPQLAGRLT QEFGRGFDAS NLRNMRTFYQ AFPIRDALRH ELSWTHYRRL
LRVESEAARQ WYVSEAVRQN WSSRALERQI GTLYYERLLA SQDKAAVAAE ASALLAPLSQ
TPREFVRDSV LLEFLGLPGT GRLLESDLEQ GLMDKLQAFL LELGKGFAFV ARQQRISTES
KDFYIDLVFY NYLLKCFVLF DLKTGELAHQ DIGQMDMYVR MYDELKTGPD DNPTVGIILC
SQKDASVVRY SVLNGSEQLF ASRYKLVLPS EEELRRELDR ERASLMGQVE ADGPADAGG