Gene Pnap_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0964 
Symbol 
ID4687742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1017155 
End bp1017991 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID639833962 
Producthypothetical protein 
Protein accessionYP_981202 
Protein GI121603873 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATA CCCCTGACCA CTTCCGCCAA GCCCTTGCAG CCGCTGGCCT GACCCCATCG 
GGTGACTTGA ATCTGACGGG CGACGGCAAA CTGCAGCGCT ACCGCATCGA GGGCGACAAG
GCGGGCAGCC GCAACGGCTG GGCCGTGCTG TACAGCCATC CGGTGATGGC CGGTGCCTTT
GGCAGCTGGA AAACCGGCGA GTCGCACACA TGGTGCGAAA AGCGCAGCGA CAAGCCGCCC
ACACCTGCAG AGCGGGCCGA ACTGCAACGC CAGATGAAGG CAGCGCAGGC CGCGCGGGCG
ACTGAGCTGG GCAATGTGCA GGCGTCTGCA CGCGAGCGAG CCGCCAAGCT GTGGGCCACG
GCTCGCCCGG CCACCAATGC GCACCCCTAC CTGAAAAAGA AGCAGATCGG CGCTTACGGC
ATTCGCCAGC TGCGCGACAT GCTGGTCATT GCAGCGCGTG ATGTGCAGGG CGAGCTGCAC
ACGCTGCAGT TCATCAGCCC GGACGGCTCC AAGCGCTTTC TGACGGGCGG GCGCATCGCG
GGCTGCTACT TCGCCATTGG CAGGCCAGTG GACTCGCTGC TGCTGTGCGA GGGCCTGGCG
ACGGCCAGCA CGCTCTACCA GGCCACGGGA CGGGCCGTGG CGGTGGCGTT CAATTGCGGC
AACCTGCTGG CCGTGGCGAA GGCGCTGCGC GGTAAGTTTC CCGCGCTTCG CATGATCGTC
TGTGCGGACA ACGATTTTCA GACGCCGGGC AATCCGGGCG TGACCCATGC GCGGGCGGCG
GCACGGGCCG TGGGCGGCTA TTTGGCTATC CCCAAGTTCC CGGAGGTACG ACCATGA
 
Protein sequence
MSHTPDHFRQ ALAAAGLTPS GDLNLTGDGK LQRYRIEGDK AGSRNGWAVL YSHPVMAGAF 
GSWKTGESHT WCEKRSDKPP TPAERAELQR QMKAAQAARA TELGNVQASA RERAAKLWAT
ARPATNAHPY LKKKQIGAYG IRQLRDMLVI AARDVQGELH TLQFISPDGS KRFLTGGRIA
GCYFAIGRPV DSLLLCEGLA TASTLYQATG RAVAVAFNCG NLLAVAKALR GKFPALRMIV
CADNDFQTPG NPGVTHARAA ARAVGGYLAI PKFPEVRP