Gene Pnap_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0962 
Symbol 
ID4688755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1014356 
End bp1015252 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content58% 
IMG OID639833960 
Producthypothetical protein 
Protein accessionYP_981200 
Protein GI121603871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.37236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGA AGCCCTTAGA CGAAAAAGAC AGGCAAGCCA TGCAGCACCT GATCGACGGC 
TTGGCATGCT GCGCCTATGG CATTGCCATG CTGCAGCTGC GCAGGTTTCC TCAGGATCAA
GTCGTGGCGG TGCTTGAGCG TGTAGCCGCT GGCGAAGTGG TCATGACGTT GAGCACTTCC
ATGACGGGTG ATGAAACCGC GCTGCTGGGA ATATTTCACG ACCGCTCAAG CCATGCCTCC
GTGGAGTTTT TGCACCAGGT GCTTCAACCC GCTGGCGAGG CATCGCTCAA GAGTGCGCTG
GACGAAATGC CAGCGACGCC CGCCGATAAG CTGGCCGCGC TGTTTCAGGG ACTTTCCCGC
AGTAGCGTCA CCAGTCCGGT TTTGCCATCC GTCCGCGAGT GGGCCATGGC CGGTATCCGC
TCTGCGGTGC AGTCAGGTGA CTCCCTGGAC GAAACCCTAG GCTTCAAAGG CGCGGGCAAG
AGAAGCCTGG CCGCGACGCT GGACACGCAA AACCGCGACC GGAGCCTGCT GGCCGCATTG
CAGCATGTTG CCGTGCCTGA TGCCGGTGTG TCAGATTGGG AACGGTGCCT GAGGCTGGCC
AAGCTCATCA AAAGCTTTTC AAAAATCGAC TGGCCCAAGG TTTGCCGGGA TGCTGCGCCA
GCGCCTGGCT GGCCACAATG GAAAAAATGC CTGTTTGCCG CAGCTCAGAG CGCCCATGGA
AGCAGCCCGA AGGATTGCAA ACTGCCGTCC TCAGCCACAC GCCTTTACCA GATCGTTCAA
GCGAACACGG GCTATTCATT GAAGGGAGGA GCGGCGACAG TGCTTGCTAG TTATCGCAAA
TCAGCCAACA CATGTCCACT TCAAAAATCT CCATCTTCTC TGAAATCGGC AGCGTAG
 
Protein sequence
MSMKPLDEKD RQAMQHLIDG LACCAYGIAM LQLRRFPQDQ VVAVLERVAA GEVVMTLSTS 
MTGDETALLG IFHDRSSHAS VEFLHQVLQP AGEASLKSAL DEMPATPADK LAALFQGLSR
SSVTSPVLPS VREWAMAGIR SAVQSGDSLD ETLGFKGAGK RSLAATLDTQ NRDRSLLAAL
QHVAVPDAGV SDWERCLRLA KLIKSFSKID WPKVCRDAAP APGWPQWKKC LFAAAQSAHG
SSPKDCKLPS SATRLYQIVQ ANTGYSLKGG AATVLASYRK SANTCPLQKS PSSLKSAA