| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0961 |
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| Symbol | |
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| ID | 4688816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1012476 |
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| End bp | 1014401 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639833959 |
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| Product | peptidase S14, ClpP |
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| Protein accession | YP_981199 |
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| Protein GI | 121603870 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.019957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTT CAAAAATCTC CATCTTCTCT GAAATCGGCA GCGTAGTAAC CGCCGAAAAC
ATCCGCTCGC AGCTTTCCTA CATCGATGAC GCCACGCCGT TGATTGTTGA AATCAACAGC
GAAGGCGGCA GCGTGTCCGA AGCCGTCGCC ATCTACAACC TGCTGCGCAC CTGGAAAGGC
GGCGTGACCG TGGAAATTGT GGGCTGGGCC TTGAGCGCAG CAACCGTTAT CGCCATGGCC
GGGCAGCGCA TCAAGGCCCA TGCCACCTCT CTCATCATGG TTCATGCGCC CTGGACCAAT
GCCTCCGGCA ATGCTGGCGC CATGCGCGAA AACGCGGCGC TGCTCGACCA GGTAGCCCTC
ACGATGCAAG CCGCTTATGC CCGCACCAGG CAGCCAGCCA AGACCTTGGC CGCCTGGATG
GATGGGCAAG ACCACTGGTT TACAGCGCAG GAAGCCCTGG CGCTTGGCCT GGTGGACGAA
ATTATCTCAG CGGACGCCCG TGCGGCGGCG CCCGCCAATG TTCTTGCCTG CCGCCATCCC
ATCCCTCTCA ACTTTCAAAC AAGGATTTCA GCCATGACCA TTACCAATAC CACACCTGAT
GCGGAACAGA TCCGCGCCGA AGCCATCCGC GCCGATGGCG AGCGGCGCCA AAGCATCCGC
TACAGCTTTG CTAAGTTTTC CAGCCGTGAG GGCATAGAAG CGGTGCAGCG TGCTTGCGAA
GACGATCATC AATGCACCGC TGCTGCTGCA GGCTTGAAAC TTCTGGCATT TTTAGGAAAA
GACGCCTCCA GTGTGAATGG CTGGAATATC GTTAACCCAA ACGATGGTTT TAGTTATAAC
GGCAACAGCA CCGGCCCCCG CATGCCTGAT TTCAAAGCAG CGGCTGTCGA TGTCTTACTG
GAGCGTGCCG GCATCCGGGT TGCCAAGCCT CACCCTCAGG CGGCTGACTT GCGCCGCACT
TCTATCGTCG GGATGGCTGA GCGCATTCTC AGCATGCATG GCAAGTCGAG CGTCGGCATG
AGCAAAGGCC AAGTTATCAA GGCCGCCATG TCCACCGATG ATTTTCCGCA GTTGCTTTCA
GACCTCACGG GCAAGGCCAT GCGTGTGGGC TATAACTCTG CGCCTGCCAC GCATGCCGGC
TGGACCGGCG AGCGCGAAGT GTCCAACTTC AAAAAGCAAA CGCTCGCCAT GCTGTCTGAA
GCGCCTGGCC TGGAGCAAGT GCCGGAAGGC GGCGAGTACC GCTTTGGCGC TTATGCCGAG
TCTGCTGAAT CATTCACAGT GAAAACCTAC GGCAAGATGG TGCGCTTCAC CCGTCAGGCG
CTCATCAATG ACGAGCTGGG CGCCCTCACG TCGATTCCAA GCACCCAAGG CGCAGCGGCC
CGGCGCTTGG AAGCTGACCT GGTGTACGGA AAGCTCACCA GCAATCCGGT AATGTCCGAT
GGCCTGCAGC TGTTCCATGC GGGTCATAGC AACCTGGCCG CTGCCGGCGC TGCCTTGAGT
GTCGAATCGC TGGGCGCATC GCGTGCGGCC ATGCGCAAGC AAAAGGGCAT CAACGGCAGC
GAGCATATCG ACCCGCAGCC GCGTTACCTG CTTGTGCCTG TCACCCTGGA AACCAAGGCC
GAGGCGCTGC TGAACTCTAC GGTGGACCCA TCGCGCAACA ACAACAGCGA AAACCCCGAT
TGGATTCGTC GCTTGACGCT GGTGGCTGAT CCGCGCCTTG ACAGCAACAG CGAGGCGGCA
TGGTACCTGG CGACCGACCC AGCGCAGATG GAAGGCATTG TGCGTGCCTA CCTGGAAGGC
GAGCAGCGCC CGTTCCTGGA AGAGCAGGAA GGCTGGAAAA CAGACACCAC GGATTACAAG
GTACGCCTGG ATGTGGGTGT AGGCGTGATT GACTACCGTG GGCTCTACAA GAACCCCGGC
GCGTAA
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| Protein sequence | MSTSKISIFS EIGSVVTAEN IRSQLSYIDD ATPLIVEINS EGGSVSEAVA IYNLLRTWKG
GVTVEIVGWA LSAATVIAMA GQRIKAHATS LIMVHAPWTN ASGNAGAMRE NAALLDQVAL
TMQAAYARTR QPAKTLAAWM DGQDHWFTAQ EALALGLVDE IISADARAAA PANVLACRHP
IPLNFQTRIS AMTITNTTPD AEQIRAEAIR ADGERRQSIR YSFAKFSSRE GIEAVQRACE
DDHQCTAAAA GLKLLAFLGK DASSVNGWNI VNPNDGFSYN GNSTGPRMPD FKAAAVDVLL
ERAGIRVAKP HPQAADLRRT SIVGMAERIL SMHGKSSVGM SKGQVIKAAM STDDFPQLLS
DLTGKAMRVG YNSAPATHAG WTGEREVSNF KKQTLAMLSE APGLEQVPEG GEYRFGAYAE
SAESFTVKTY GKMVRFTRQA LINDELGALT SIPSTQGAAA RRLEADLVYG KLTSNPVMSD
GLQLFHAGHS NLAAAGAALS VESLGASRAA MRKQKGINGS EHIDPQPRYL LVPVTLETKA
EALLNSTVDP SRNNNSENPD WIRRLTLVAD PRLDSNSEAA WYLATDPAQM EGIVRAYLEG
EQRPFLEEQE GWKTDTTDYK VRLDVGVGVI DYRGLYKNPG A
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