Gene Pnap_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0950 
Symbol 
ID4688999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1001691 
End bp1002497 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID639833948 
Productmalonate decarboxylase gamma subunit 
Protein accessionYP_981188 
Protein GI121603859 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA CCCCTTTGAG CCGTGGCGCC ACCTGGCTGG CCGCCCTGAC CGGCAACGCC 
ACAGGCCTGC CCGGCTACCC GCCGTCGGTG CGCGTGGTCG ATGCGCCGCT GGCAGGCCAG
CCGGCGCGCT ACATCGCGGT CGTGCCGGAC GCCCAAAGCA GCTACCCGCG CGCGCGCACC
GGCGAGACCG GGCTGGTCGA AGGCTGGGCG CTGGCGCAGG CCGTGCATGA GGCCATCGCG
GCCGATCGCG AGGGCGCCAA ACGCGCCATC GTCGCGGTGA TCGACGTCAG CAGCCAGGCC
TATGGCCGGC GCGAGGAGGC CTTCGGCATC CACCAGGCGC TGGCCGGCGC CGCCGGGGCC
TATGCGCAGG CGCGCCAGCA CGGCCATCCG GTGATCGGCC TGATCGTCGG CAAGGCGATG
TCCGGCGCCT TCCTGGCCCA CGGCTACCAG GCCAACCGGC TGATTGCGCT GAACGACGAC
GGCGTGATGG TGCATGCCAT GGGCAAGGCC GCCGCCGCCC GCGTGACGCT GCGCAGCGTC
GAGGATCTGG AGCGGCTGGC CGCCGACGTG CCGCCGATGG CCTACGACAT CGCTAGCTAC
GCCACGCTGG GCTTGCTGTG GAAGCTGGTG GACGTGGGCA GCGCCGAACA GCCGTCGGCC
GCCGATGTGG ACATCGTGCG CGGCGCGCTC GTGGCCGCGC TGGACAACAT CCGCGCCGAC
CCGGCGCCCG ATCTGCGCAG CCGTCTGGGC GGCGCCAACC GGCAGGCTTC GTCGCTGGTA
CGCGAGAAGC TGCGCGCGCA ATGGTGA
 
Protein sequence
MNETPLSRGA TWLAALTGNA TGLPGYPPSV RVVDAPLAGQ PARYIAVVPD AQSSYPRART 
GETGLVEGWA LAQAVHEAIA ADREGAKRAI VAVIDVSSQA YGRREEAFGI HQALAGAAGA
YAQARQHGHP VIGLIVGKAM SGAFLAHGYQ ANRLIALNDD GVMVHAMGKA AAARVTLRSV
EDLERLAADV PPMAYDIASY ATLGLLWKLV DVGSAEQPSA ADVDIVRGAL VAALDNIRAD
PAPDLRSRLG GANRQASSLV REKLRAQW