Gene Pnap_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0945 
Symbol 
ID4689406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp997184 
End bp997831 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID639833943 
ProductDTW domain-containing protein 
Protein accessionYP_981183 
Protein GI121603854 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0983717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG CCTCCCCGAC CAAACGCCTG GCATGCGCCA CCTGCCTGCG CCCGCAAAGC 
GCCTGCATCT GCCAGTGGAT CACGCCCGTG GCGCACGAAG TCGAGGTGCT GATCCTGCAG
CATCCGCTTG AAGTGGACAA CGCCAAGGGC AGCGCGCGCC TGCTACACCT GAGCCTGCCG
CGCAGCCGGC TGGTGACGGG CGAAGTGTTC GACCTGCCGG CCTTGCTGGC CGGGCCGCCC
GAATCCGGCC CCACCAGGCA GTCGGTGCTG CTGTACCCGG ACACGCCGCA AGACCAGGCG
CCAAGCCTGT CGCCGCCGCC CATGCTGGCG CCCGAGCTGT TGCGCGACCC CTCGCGCTTG
CGCCTGATCG TGCTGGACGG CACCTGGCGC AAGAGCCGCA AGATGCTCTA CCGCAATCCG
CTGCTGCAGC AGCTGCCGCG CCTGTCGCTG CAGGACATGC CGGCTTCGCA CTACCTGATC
CGCAAGGCGC ACCGGCCCGA CCAGCTGTCC ACGCTGGAGG CGACCTGCGC CGCGCTGATG
CAGCTCGAAG GCAGCGTTGA GAAGTTTCAA CCCCTGATGG CGGCATTCGA CGGCTTCGTG
GCGCAGCAGC TGGGCTACCG CGCAGCAGGC GGCACGACAG GCTTCTAA
 
Protein sequence
MTPASPTKRL ACATCLRPQS ACICQWITPV AHEVEVLILQ HPLEVDNAKG SARLLHLSLP 
RSRLVTGEVF DLPALLAGPP ESGPTRQSVL LYPDTPQDQA PSLSPPPMLA PELLRDPSRL
RLIVLDGTWR KSRKMLYRNP LLQQLPRLSL QDMPASHYLI RKAHRPDQLS TLEATCAALM
QLEGSVEKFQ PLMAAFDGFV AQQLGYRAAG GTTGF