| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0944 |
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| Symbol | |
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| ID | 4689705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 995002 |
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| End bp | 997023 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833942 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_981182 |
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| Protein GI | 121603853 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGATT ACGAACAACA TCAGCGACTC TCCAATCCCC AGAACAACCG GGCCATCATG
GCCGCATGGG ACCGCTTCTT GAGCGGGGAC ACGCCACCCT CGAATGCATT GCGCTGCCTG
ATTGATGATT CGTGGCGGCG TTGCCTGGAG GTGCATGTCG ATCCCGCCCG CCAGCAGGCG
GCATCCCCGG TCAACGAGTC AACCCTGCAT TCGCTGCAGC ACCAGCACCG TGAATTGCTG
GGCGCGGCCA AGCAGGTCAT GGCCATGGCC AGGGATTTCC TCGCCCAAAG CGAGACGATC
ATGATGCTGA GCGATCCGAA CGGGATGATC CTGGGCGTTG AAGGCGACCC GCGCGCACTC
GAAGCCGCCG GCGCTATCCA CCTCATCGCC GGGAGTTGCT GGAGTGAACG GGTGTGTGGA
ACCAACGCCA TCGGCACGGC GCTGTCCATC GGCCAGCCGG TACAGATTCA CGCGGCAGAG
CATTTTTGCG CCGGCATCAA GGAGTGGACC TGTTCGGCCA CCGTCATCCG CGACCCCTAC
GACGGAAAAA TCCTGGGCAC CATTGATGTC TCCGGTCTTG GCAAAACCTT CAGCCCGCAC
AGCCTGGCTC TGGCCGTGAC CACGGCCAGC CGCATCGAGA GCCAGCTGGC CAAGCTGGAG
ATGGATGTCC GCTACCAGTT GCTGGAGCGT GGCGCGGCCA TCATGTCCGG CGCGACGGAC
GGCGTCATCA TTTGTGACCG GCGCGGTTTC CCGATCAAGG CCAACGAGCG CGCCGCCGCC
GCGCTGCTGG CCCGGGGCAT CGACTTCAAC CTGAAAAACA CCACCCAGAT TTCAGCCTTG
AGCACCGGCA CCTTCGCGCC CGCCACGCCC GCCGAGGCGC CGCAATGGCT GCGCGACGAC
TGGCTGGAGC CGATCGTGGA TGCCGGCGAG CGCATCGGAA CGCTGCTGAC GATTCCCGTG
CTGCAGCCCA GTGGCATGGC ATCGGGCTGG CAGCGAAAGG AAAAAGCCGC GAAAGAAACG
AAGAGCCCGG ATGTCAAGGG TTTCGAGGCC CTCATCGGCA GCAGCGCGCC GCTGCTCCAG
GCGATCCATA AAGCGAAAAT GCTGGCGAAA TCGAGCGTGT CGGTGCTGCT GCTCGGGGAA
ACCGGCGTGG GCAAGGAAAA TTTTGCGCAG GGCCTGCACC GCTTCGGCCA GATCGGCGAG
CGGCCTTTCG TGGCGCTCAA CTGCGGCAGC CTGTCGCGCG ACCTGCTGGC CAGCGAGCTT
TTCGGCCATT GCGAAGGCTC CTTCACCGGA GCGCGGCGCG GCGGCATGAT GGGCAAGATC
GAGGCGGCCA ATGGCGGCAC CCTGTTTCTC GATGAAATCG GGGAAATGCC GCTGGAGCTG
CAGCCGCATT TCCTGCGCGT CCTCGAAGAG AGCGAGATTT ACCGCATCGG TGAGAATTCG
CCGCGCAAGG TGTCGTTCAA GCTGGTGTCT GCCACCCACC GCAATCTTCG CGACGAGGTG
ACGGCCGGGC GCTTTCGCAT GGATCTTTTT TACCGGGTAT CGGTCACCAG CCTGCAGATT
CCGTCATTGC TTGAACGCCG CCTGGACATT CCCTTGCTGG TGGCGCATTT TCTCTCCCAG
CTTTCAAAAA AATACAGCGT CCCGCCCAAG ACAATCAAGC CCGAGGCGCT CGCTGCGCTT
GGACGGTATG CCTGGCCGGG CAACGTGCGG GAGCTGCGCA ACGTGGTGGA GAGCATGTTT
TTGATGGCCG ACGGGGAAGT GCTGGGCCTG GAAGACCTGC CGCCCGAAAT CGGCGCGCTG
CGGGCGTCCG ATGCCGAAGA AAACAGCCCG GCTCCCACGC CAGGCATCGG CAAACTCGAA
GACCTGGAGC TGGAGTTCAT CCGCAAGACG ATAGCGGCGG ACGGCGGCAA TCTGACGCTG
GTGGCCAAGC ATCTTGGCAT TGCCAAGAGC ACGCTTTATA TCAAGCTCAG AAAGTATGGG
CTGATGCCCA TGGAGCCCAC GCTGAGCAGC CATCACTTGT GA
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| Protein sequence | MSDYEQHQRL SNPQNNRAIM AAWDRFLSGD TPPSNALRCL IDDSWRRCLE VHVDPARQQA
ASPVNESTLH SLQHQHRELL GAAKQVMAMA RDFLAQSETI MMLSDPNGMI LGVEGDPRAL
EAAGAIHLIA GSCWSERVCG TNAIGTALSI GQPVQIHAAE HFCAGIKEWT CSATVIRDPY
DGKILGTIDV SGLGKTFSPH SLALAVTTAS RIESQLAKLE MDVRYQLLER GAAIMSGATD
GVIICDRRGF PIKANERAAA ALLARGIDFN LKNTTQISAL STGTFAPATP AEAPQWLRDD
WLEPIVDAGE RIGTLLTIPV LQPSGMASGW QRKEKAAKET KSPDVKGFEA LIGSSAPLLQ
AIHKAKMLAK SSVSVLLLGE TGVGKENFAQ GLHRFGQIGE RPFVALNCGS LSRDLLASEL
FGHCEGSFTG ARRGGMMGKI EAANGGTLFL DEIGEMPLEL QPHFLRVLEE SEIYRIGENS
PRKVSFKLVS ATHRNLRDEV TAGRFRMDLF YRVSVTSLQI PSLLERRLDI PLLVAHFLSQ
LSKKYSVPPK TIKPEALAAL GRYAWPGNVR ELRNVVESMF LMADGEVLGL EDLPPEIGAL
RASDAEENSP APTPGIGKLE DLELEFIRKT IAADGGNLTL VAKHLGIAKS TLYIKLRKYG
LMPMEPTLSS HHL
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