Gene Pnap_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0933 
SymbolpanC 
ID4689781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp982070 
End bp982921 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID639833931 
Productpantoate--beta-alanine ligase 
Protein accessionYP_981171 
Protein GI121603842 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG TCCACACCAT TGCGGAGTTG CGCCAGCAGC TCAGCGGCTT CAAGCGCCCG 
GCCTTCGTGC CGACCATGGG CAACCTGCAC GAAGGACATA TTGCCCTGGT CCGGCAGGCC
AGGCCGCTGG GCGATGTGAC CGTGTCCAGC ATTTTTGTCA ACCGCCTGCA GTTCGCGCCG
CATGAAGACT TCGACAGCTA CCCGCGCACG CTCGACGCCG ACGCCGAGCG GCTGGAAGCG
GCCGGCTGCG ACGTGGTGTT TGCCCCGCGC GAGAAAGACC TGTACCCTGA GCCGCAAACC
TTCAAGGTGC ATCCGGCGAC CGACCTGAGC GACATCCTCG AAGGCCATTT CAGGCCCGGT
TTTTTCATTG GCGTGAGCAC CGTGGTGATG AAGCTGTTCT CGTGCGTGTT CGCCGGCATG
CCCACGGGCG TGGCCGCCTT CGGCAAAAAG GACTACCAGC AGGTCATGGT GGTGCGCCGC
CTGGTGCAGC AGTTTGCCCT GCCCATCGAG ATCCTGGCCG GCGAAACCCA GCGCGCCGAA
GACGGGCTGG CGCTGTCGTC GCGCAACAGC TACCTCTCCC CGGCCGAGCG GCAGGAAGCG
GTGCATCTGT CCCGGGCGCT GCGTGCGCTG GGCGAAGCGG CCCGTGCGGC CACCGGCCAG
CCCGACCTGG CAGCGCTTGA ATCCCAGGCC CTGCAGGCAC TGGCGCGGCG TGGCTGGAAG
CCCGACTACC TGACCGTGCG CAGGCGCGCC GACCTGGCGC CGCCGCAGGG CGCGCTGGCC
GATGTGCCGC TGGTGGTGCT GGGCGCCGCC AAGCTGGGCA ACACCCGGCT GATTGACAAC
CTGGAGATTT GA
 
Protein sequence
MHIVHTIAEL RQQLSGFKRP AFVPTMGNLH EGHIALVRQA RPLGDVTVSS IFVNRLQFAP 
HEDFDSYPRT LDADAERLEA AGCDVVFAPR EKDLYPEPQT FKVHPATDLS DILEGHFRPG
FFIGVSTVVM KLFSCVFAGM PTGVAAFGKK DYQQVMVVRR LVQQFALPIE ILAGETQRAE
DGLALSSRNS YLSPAERQEA VHLSRALRAL GEAARAATGQ PDLAALESQA LQALARRGWK
PDYLTVRRRA DLAPPQGALA DVPLVVLGAA KLGNTRLIDN LEI