Gene Pnap_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0926 
Symbol 
ID4690092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp976537 
End bp977976 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content60% 
IMG OID639833924 
Productcarboxyl-terminal protease 
Protein accessionYP_981164 
Protein GI121603835 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.388847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGA AGCTCAAGAT AGCAGGCTGG ATTTCAATCG GCGCCATGGC CGGGGCATTG 
ACGACCGTGC AGTTGCAGGC GGTTGCACGT GCCGGCATGG CACCTTTGCC GCTCGAAGAA
TTGCAGCAAC TCGCGGCCGT CTTCGGCATG GTCAAGACTG ATTACGTCGA GCCCGTGGAC
GAAAAGAAAC TGATTACCGA TGCAATTTCC GGCATGGTTG CCAGTCTGGA CCCGCATTCG
GTGTATTTCG ACAAGAAAAC CTACAAGGAA TTCCGCGAAG GTACCTCGGG CCGCTTTGTC
GGCGTGGGCA TCGAGATCAG CCAGGAAGAC GGCCTGGTCA AGGTGGTGTC GCCGATTGAA
GGCTCGCCGG CCGACCGCGC CGGACTCAAG CCGAACGACC TGATCACCCG CATTGATGAC
ACTGCAGTCA AGGGCCTGAG CCTGAACGAT GCGGTCAAGA AAATGCGCGG CGAACCCCAG
ACCAAGGTGA TGCTGACGAT TTTCCGCAAG GACGAAAGCC GCACCTTTCC GGTCACCATC
ACGCGCGAGG AAATCCGCAC CCAGTCGGTT CGCAGCAAGG TGATCGAGCC GGGTTATGCC
TGGATTCGCC TGAGCCAGTT CCAGGAACGC ACGGTTGACG ACTTTGTGGT CAAGATTGAG
CAGATTTACA AGCAGGAACC CAAGCTTAAA GGCCTGGTGC TGGACCTGCG CAATGACCCG
GGCGGATTGC TCGATGCGGC GGTGGCGGTT TCAGCGGCCT TTTTGCCCGA AAACGTGACC
GTGGTTTCCA CCAACGGCCA GCTGGTCGAA AGCAAGTCCG TTTACAAGGC TTCGCCCGAG
TTTTACCAGC GCCGCAATGG CGCTGATCCG CTCAAGCGCC TGCCGGCCGC ACTCAAGACC
GTGCCGCTCG TGGTGCTGGT CAATGAAGGC TCGGCCTCGG CCAGCGAGAT CGTGGCCGGC
GCGCTGCAGG ACTACAAGCG CGCAACCATC ATGGGCAACC AGACGTTTGG CAAGGGTTCG
GTCCAGACGG TTCGTCCGCT GGGCCCTGAC ACGGGCATCA AGCTGACCAC GGCGCGCTAT
TACACGCCGA GCGGCAAGTC GATCCAGGCG CGCGGCATCG TGCCCGACGT GATGATTGAT
GAAACCGCCG AAGGCAGCCC GTTTGCGGCA TTGCGTACCC GTGAAGCCGA CCTGGAAAAG
CACCTGAACA GCGGACAGGG TGCTGAATTG AAAGACCCGG GCCGCGAAAA AGCCCGCGAG
GAAGCCATGA AACGGCTTGA AGAAGAAGCC AAGAAAACGC CCGAGCAGCG CCGTCCGCCC
GAATTGGGCA GCGACAAGGA CTTCCAGTTG GCCCAGGCCA TCAACCAGCT CAAGGGCCGT
CCGGTGCTGG TCAGCAAGAC GGCAGTTGTC GAGCCCAAGA ACGAAAAGAA AGAAAACTAG
 
Protein sequence
MGQKLKIAGW ISIGAMAGAL TTVQLQAVAR AGMAPLPLEE LQQLAAVFGM VKTDYVEPVD 
EKKLITDAIS GMVASLDPHS VYFDKKTYKE FREGTSGRFV GVGIEISQED GLVKVVSPIE
GSPADRAGLK PNDLITRIDD TAVKGLSLND AVKKMRGEPQ TKVMLTIFRK DESRTFPVTI
TREEIRTQSV RSKVIEPGYA WIRLSQFQER TVDDFVVKIE QIYKQEPKLK GLVLDLRNDP
GGLLDAAVAV SAAFLPENVT VVSTNGQLVE SKSVYKASPE FYQRRNGADP LKRLPAALKT
VPLVVLVNEG SASASEIVAG ALQDYKRATI MGNQTFGKGS VQTVRPLGPD TGIKLTTARY
YTPSGKSIQA RGIVPDVMID ETAEGSPFAA LRTREADLEK HLNSGQGAEL KDPGREKARE
EAMKRLEEEA KKTPEQRRPP ELGSDKDFQL AQAINQLKGR PVLVSKTAVV EPKNEKKEN