Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0926 |
Symbol | |
ID | 4690092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 976537 |
End bp | 977976 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639833924 |
Product | carboxyl-terminal protease |
Protein accession | YP_981164 |
Protein GI | 121603835 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.388847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGA AGCTCAAGAT AGCAGGCTGG ATTTCAATCG GCGCCATGGC CGGGGCATTG ACGACCGTGC AGTTGCAGGC GGTTGCACGT GCCGGCATGG CACCTTTGCC GCTCGAAGAA TTGCAGCAAC TCGCGGCCGT CTTCGGCATG GTCAAGACTG ATTACGTCGA GCCCGTGGAC GAAAAGAAAC TGATTACCGA TGCAATTTCC GGCATGGTTG CCAGTCTGGA CCCGCATTCG GTGTATTTCG ACAAGAAAAC CTACAAGGAA TTCCGCGAAG GTACCTCGGG CCGCTTTGTC GGCGTGGGCA TCGAGATCAG CCAGGAAGAC GGCCTGGTCA AGGTGGTGTC GCCGATTGAA GGCTCGCCGG CCGACCGCGC CGGACTCAAG CCGAACGACC TGATCACCCG CATTGATGAC ACTGCAGTCA AGGGCCTGAG CCTGAACGAT GCGGTCAAGA AAATGCGCGG CGAACCCCAG ACCAAGGTGA TGCTGACGAT TTTCCGCAAG GACGAAAGCC GCACCTTTCC GGTCACCATC ACGCGCGAGG AAATCCGCAC CCAGTCGGTT CGCAGCAAGG TGATCGAGCC GGGTTATGCC TGGATTCGCC TGAGCCAGTT CCAGGAACGC ACGGTTGACG ACTTTGTGGT CAAGATTGAG CAGATTTACA AGCAGGAACC CAAGCTTAAA GGCCTGGTGC TGGACCTGCG CAATGACCCG GGCGGATTGC TCGATGCGGC GGTGGCGGTT TCAGCGGCCT TTTTGCCCGA AAACGTGACC GTGGTTTCCA CCAACGGCCA GCTGGTCGAA AGCAAGTCCG TTTACAAGGC TTCGCCCGAG TTTTACCAGC GCCGCAATGG CGCTGATCCG CTCAAGCGCC TGCCGGCCGC ACTCAAGACC GTGCCGCTCG TGGTGCTGGT CAATGAAGGC TCGGCCTCGG CCAGCGAGAT CGTGGCCGGC GCGCTGCAGG ACTACAAGCG CGCAACCATC ATGGGCAACC AGACGTTTGG CAAGGGTTCG GTCCAGACGG TTCGTCCGCT GGGCCCTGAC ACGGGCATCA AGCTGACCAC GGCGCGCTAT TACACGCCGA GCGGCAAGTC GATCCAGGCG CGCGGCATCG TGCCCGACGT GATGATTGAT GAAACCGCCG AAGGCAGCCC GTTTGCGGCA TTGCGTACCC GTGAAGCCGA CCTGGAAAAG CACCTGAACA GCGGACAGGG TGCTGAATTG AAAGACCCGG GCCGCGAAAA AGCCCGCGAG GAAGCCATGA AACGGCTTGA AGAAGAAGCC AAGAAAACGC CCGAGCAGCG CCGTCCGCCC GAATTGGGCA GCGACAAGGA CTTCCAGTTG GCCCAGGCCA TCAACCAGCT CAAGGGCCGT CCGGTGCTGG TCAGCAAGAC GGCAGTTGTC GAGCCCAAGA ACGAAAAGAA AGAAAACTAG
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Protein sequence | MGQKLKIAGW ISIGAMAGAL TTVQLQAVAR AGMAPLPLEE LQQLAAVFGM VKTDYVEPVD EKKLITDAIS GMVASLDPHS VYFDKKTYKE FREGTSGRFV GVGIEISQED GLVKVVSPIE GSPADRAGLK PNDLITRIDD TAVKGLSLND AVKKMRGEPQ TKVMLTIFRK DESRTFPVTI TREEIRTQSV RSKVIEPGYA WIRLSQFQER TVDDFVVKIE QIYKQEPKLK GLVLDLRNDP GGLLDAAVAV SAAFLPENVT VVSTNGQLVE SKSVYKASPE FYQRRNGADP LKRLPAALKT VPLVVLVNEG SASASEIVAG ALQDYKRATI MGNQTFGKGS VQTVRPLGPD TGIKLTTARY YTPSGKSIQA RGIVPDVMID ETAEGSPFAA LRTREADLEK HLNSGQGAEL KDPGREKARE EAMKRLEEEA KKTPEQRRPP ELGSDKDFQL AQAINQLKGR PVLVSKTAVV EPKNEKKEN
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