Gene Pnap_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0925 
Symbol 
ID4689659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp975630 
End bp976430 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID639833923 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_981163 
Protein GI121603834 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.246319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGG TTTTTCATTT TTCCATTCCC ATGAACGACG AACAGCTGCT TCGCTATTCC 
CGGCACATCC TGCTCGATGA AATAGGCATT GAAGGCCAGC AAAAGCTTCT CGCCTCGCAT
GTGCTGATCA TTGGCGCAGG CGGGCTGGGC TCGCCGGTGG CCCTGTACTT GGGGAGCGCC
GGCGTTGGCC GCATCACCGT GGTCGATCAT GACCGCGTGG ATGCGACCAA CCTGCAGCGC
CAGATTGCGC ATACGGTCGC GCGCATTGGT GAATTCAAGG CGGAATCGGT GCTCCAGGCC
GTCGCCGCGC TCAACCCTGA TGTGAAAGTG ATCCCGGTGA CGCAGCGGGC TGACGACGCC
CTACTTGACC GGCTGGTCGG GCAGGCAGAC CTGGTGCTTG ACTGCACCGA CAACTTCTCG
ACCCGCCACG CCATCAACCG GGCCTGCGTC AAGCACGACA AGCCGCTGGT GTCGGGCGCT
GCGATCCGCT TTGATGGCCA GATCACGGTC TATGACCCGC GCAGTCCTGA CTCGCCTTGC
TATGCCTGCA TCTTTCCTGA ATCAGACCTG CCCGAAGAAA CCCGCTGCGC CACCATGGGC
GTGTTTGCAC CGCTGGTCGG CATCGTGGGC ACGGTACAGG CTGCCGAGGC CCTGAAGCTG
CTGTGCGGCA TCGGAACGCC ACTGACCGGA CGGCTGCTGA TGCTTGATGG CAGGGGCATG
GAGTGGAACG AGATGAAACT GTCACGCAAC AAGGCGTGCG CAGTCTGCGG CATTGAAGCA
GCGGAATCGC CAGCCGCCTG A
 
Protein sequence
MPAVFHFSIP MNDEQLLRYS RHILLDEIGI EGQQKLLASH VLIIGAGGLG SPVALYLGSA 
GVGRITVVDH DRVDATNLQR QIAHTVARIG EFKAESVLQA VAALNPDVKV IPVTQRADDA
LLDRLVGQAD LVLDCTDNFS TRHAINRACV KHDKPLVSGA AIRFDGQITV YDPRSPDSPC
YACIFPESDL PEETRCATMG VFAPLVGIVG TVQAAEALKL LCGIGTPLTG RLLMLDGRGM
EWNEMKLSRN KACAVCGIEA AESPAA