| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0924 |
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| Symbol | |
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| ID | 4689628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 973616 |
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| End bp | 975628 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639833922 |
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| Product | AsmA family protein |
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| Protein accession | YP_981162 |
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| Protein GI | 121603833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT CCCCGTTGAA ATCCGCCTCC CTTCGCCATT GGCTGGCGGG TCTTGCCATA
TTGCTGGTTG TTCTTGTGTT GCTGCTTTCC TTTTTTCCCT GGGATTCGCT TCGCGGACCC
ATCAACAGAT ATGTGTCGGA GCAGTTGGGA CGACGTTTTG AGATCACGAA ACATCTGTCT
GTGGACCTGG GGCGCACCAC CACCGTCAGG GCGGAAGGTG TCGAAATCGC CAATCCTGAA
TGGGCGCATG ATTCCTACCT GCTCAAGGCC ACTGCTGCCG AATTCGACAT CAATCTTTTG
CCGCTTATTT TCGGAAAAGT GGTGCTGCCC CGGATCAAAT TGACTGAACC CATGATTGGC
CTGCAGATCG AACCCGATGG CCGGAGGAGT TGGGCGCTTT CTCGCGATAC CTCGGACAAA
AGTGCGGTGC CGCAGATCGG TGCTGTCGTG GTTGATCAGG GGAATGTCAG CTATCTTGCC
AAGGCACAGG GCGCTGATCT GGATGTCCAG TTTTCATTGG CCCCGGAAGC CGGGAATGAA
TTGCCTTTGA GTTACAAGGC TATCGGGCAA TGGAAGCATG AAAAATTTAC CGCCAATGGA
CGCGCAGGAG GTGTACTGGA GTTCAGCCAG AATACCCAGG CATCCTTTCC ACTTGAAGTC
AACGCAGTCG CCGGAAGAAC CAGCCTGAAG GCCAAGGGTT CGATTGCCAA TCTTGCCGAC
CTGGCCGGCA TTGATGCGAC TTTTGACCTG CAGGGCCAGA ACCTTGACGA TCTTTATAAC
TTGCTGGGTG TGGTACTGCC ATCCACGCCG CCCTACAAGC TTCGCGGCAA GCTCGACAAG
AAGGACCAAC TCTGGGTTGT CAGCCAGATT CAGGGTCTGC TGGGCAAGTC CGACCTCGGC
GGATCGCTGA GCTTTGATCA ATCTTCGGCG GTTCCGCTTT TGACTGGCAA GGTGCAATCC
AGGGTCATGG ATTTTGCGGA CTTGGGGGCA GTCATCGGCA TGGCGCCTTC TGGCGCTCTG
GCACCAAAGA AACAAGCCGT GGCTGCTTCA AACATCAAAA AACCAGCGCA AGCCAACTCA
AGCAGCAAAG CTTCACCAAC CGGAACTGCG CCTGGCAAGG TGCTGCCGCG CACGCCGCTG
GACGTGACCA AGCTCAAGGC CATGAATGCC GATGTCACCT ATTCGGCGGC CGACATCCGG
CATGTGAAGG AGTTGCCGCT GGACAAAGGC TCTGTTCACG TCAAGCTCAA TGCCGGCGTG
CTGCAACTGG AGCCGATTTC GCTCGGCGTG GCCGGTGGAT CGGTGGCGGG CACCATCCGA
ATTGATTCCA CGGTCTCCCC GGCGGCCTTT AACACCAGGC TCGATGTCCG GGCCGTGCAG
CTGAACCAGC TCTTCCCTGC GGTTGAAACC ACTAGAACCG GCCTCGGCAA AATGAGTGGT
CAGTTCGACC TGAAGGGGCG TGGAAATTCG CTGGCCCAAA TGCTCGGGTC GGCCTCGGGG
GATGTGGCGG TCCTGATGGG TAAAGGCGAA ATCAGCAACA TCCTGCTCGA ATTCATGGGC
CTGGATGGCG GAGAGGTGAT CAAGTTCCTG TTGCGCGGCG ACCGCAATGT GCAGTTAAGG
TGCGCCGCTG CCGCCTTTGA CGTGAAGCAG GGCCTGATGA GCAGCCGGGC GATTGTGCTT
GACACCAGCG ACACCGTCAT CACGGGACAA GGCCAGATCA GCCTGGCCAA CGAAACGCTG
GACATCCTGC TCAAGCCGGA GCCCAAGGAC ATGAGCATTT TGAGCCTGAG GTCGCCGCTG
CGGATTGGCG GCACGTTTGC GCACATGTCG GCAGGGCCGG AGACATCGGC GCTGGCAGGG
CGCGCAGGCA TTGCCCTGCT GCTGGCCGCC ATCAATCCCT TGCTGGCCCT GGCCTCAACC
ATCGAAACCG GGCCGGGCGA GAATGCCGAT TGCGCCGCAA TCCTGTCTAA AGCTGCCCAT
CCGGCCACCA ACGCTACCAC TGGAAAAAAG TGA
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| Protein sequence | MKNSPLKSAS LRHWLAGLAI LLVVLVLLLS FFPWDSLRGP INRYVSEQLG RRFEITKHLS
VDLGRTTTVR AEGVEIANPE WAHDSYLLKA TAAEFDINLL PLIFGKVVLP RIKLTEPMIG
LQIEPDGRRS WALSRDTSDK SAVPQIGAVV VDQGNVSYLA KAQGADLDVQ FSLAPEAGNE
LPLSYKAIGQ WKHEKFTANG RAGGVLEFSQ NTQASFPLEV NAVAGRTSLK AKGSIANLAD
LAGIDATFDL QGQNLDDLYN LLGVVLPSTP PYKLRGKLDK KDQLWVVSQI QGLLGKSDLG
GSLSFDQSSA VPLLTGKVQS RVMDFADLGA VIGMAPSGAL APKKQAVAAS NIKKPAQANS
SSKASPTGTA PGKVLPRTPL DVTKLKAMNA DVTYSAADIR HVKELPLDKG SVHVKLNAGV
LQLEPISLGV AGGSVAGTIR IDSTVSPAAF NTRLDVRAVQ LNQLFPAVET TRTGLGKMSG
QFDLKGRGNS LAQMLGSASG DVAVLMGKGE ISNILLEFMG LDGGEVIKFL LRGDRNVQLR
CAAAAFDVKQ GLMSSRAIVL DTSDTVITGQ GQISLANETL DILLKPEPKD MSILSLRSPL
RIGGTFAHMS AGPETSALAG RAGIALLLAA INPLLALAST IETGPGENAD CAAILSKAAH
PATNATTGKK
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