Gene Pnap_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0910 
SymbolntpA 
ID4686626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp963319 
End bp963783 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID639833908 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_981148 
Protein GI121603819 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.429333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.400014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAA GCCGCCCCTA CAAGATTCCC GAATCGGTTC TGGTCATCAT TTACACGCCA 
CAACTCGATG TGCTGCTGAT CGAGCGCACC GACCATCCGG GTTTCTGGCA GAGCGTTACC
GGCTCGAAAG ATACGCCGGA CGAGCCTTTG CTGGAGACGG CGCTGCGTGA GGTTGAAGAG
GAAACCGGCA TCGTTGCCAT GCCGGCCCAG ATGCGCGATT GGCGTCTTTC GAATGTGTAT
GGAATTTATC CGGCGTGGCG GCATCGCTAT GCGCCCGGCG TGACGCGCAA TACCGAGCAT
GTGTTCGGCC TGTGCCTGCC TGCAAGATGT GGCGTCACGC TGAGCCCGCG TGAACACACT
GCCGCGCAGT GGCTGGCGCA TCGGGATGCT GCGGAAAAAT GCTTTTCTCC TTCCAATGCC
GAGGGAATCT TGCTGCTGCC GAGGTTCATG CCTCCAGGCG TTTGA
 
Protein sequence
MTSSRPYKIP ESVLVIIYTP QLDVLLIERT DHPGFWQSVT GSKDTPDEPL LETALREVEE 
ETGIVAMPAQ MRDWRLSNVY GIYPAWRHRY APGVTRNTEH VFGLCLPARC GVTLSPREHT
AAQWLAHRDA AEKCFSPSNA EGILLLPRFM PPGV