Gene Pnap_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0909 
SymbolhrcA 
ID4689550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp962077 
End bp963090 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID639833906 
Productheat-inducible transcription repressor 
Protein accessionYP_981147 
Protein GI121603818 
COG category[K] Transcription 
COG ID[COG1420] Transcriptional regulator of heat shock gene 
TIGRFAM ID[TIGR00331] heat shock gene repressor HrcA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.427859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATA GTCGCGCACG TTTGTTACTC AAGGCGCTCG TTGAGCGCTA TATTGCCGAT 
GGCCAGCCGG TCGGTTCGCG CACGCTGTCC AAGGCTTCCG GCCTGGAGTT GTCGCCCGCC
ACGATCCGCA ATGTGATGAG CGACCTGGAA GACCTGGGCC TGATTGTCAG CCCGCACACC
TCTGCTGGCC GCATTCCCAC CGCACGGGGC TATCGCCTGT TTGTCGATAC GATGCTGACC
ACGCAGCGCG ACCCGTTTTC GGTCGCTGGG CAAATGGCCC GGATTGCACC GGACCAGCCA
CTCAAGGTCA TCAGCAACGC AGCCCACATG CTCTCCAGCC TGTCGCAGTT CGTTGGCGTG
GTGATGGCGC CGCGCCGCAC CTCGGTGTTC CGGCATATCG AGTTCTTGCG GCTGTCCGAA
AAGCGTTTTC TGGTGATCAT TGTTTCACCC GATGGCGATG TGCAGAACCG GGTGATCTTT
ACCGAGACCG ACTACACCGC GTCTCAATTG ATCGAGGCGT CGAACTTTCT CAACTCGCAC
TACGCCGGCA TGGCGATTGA AGAGGTGCGC GAGCGGCTGA AAAATGAAGT CGAAGCGCTC
AGGGGTGAAA TCGCCACCCT GATGCAGGAA GCCGTCCTGG TCAGCTCCGA AGCCATCGAG
TCGCGCGATG AAGTGGTTGT CTCCGGCGAG CGCAACCTGC TGGCGGTTAG CGACTTTTCC
AGCGACATGG GCAACCTTCG CAAGCTGTTT GACCTGTTCG AGCAGAAGGC GCAGCTGATG
CGCCTGCTCG ATGTCTCCAG CCGCGCCGAG GGTGTGCGGA TTTACATCGG CGGCGAAAGC
CAGGTGATTC CGTACCAGGA ACTGTCGGTG GTCACGGCGC CTTACGAGGT CGATGGTCAG
GTCGTGGGAA CCCTGGGCGT CATTGGCCCG ATGCGTATGC CCTACGAAAA AATGATCCAG
ATTGTCGATA TCACCTCCAA GCTGGTCAGC ACTGCGCTCA GCCACAGCAA ATAG
 
Protein sequence
MLDSRARLLL KALVERYIAD GQPVGSRTLS KASGLELSPA TIRNVMSDLE DLGLIVSPHT 
SAGRIPTARG YRLFVDTMLT TQRDPFSVAG QMARIAPDQP LKVISNAAHM LSSLSQFVGV
VMAPRRTSVF RHIEFLRLSE KRFLVIIVSP DGDVQNRVIF TETDYTASQL IEASNFLNSH
YAGMAIEEVR ERLKNEVEAL RGEIATLMQE AVLVSSEAIE SRDEVVVSGE RNLLAVSDFS
SDMGNLRKLF DLFEQKAQLM RLLDVSSRAE GVRIYIGGES QVIPYQELSV VTAPYEVDGQ
VVGTLGVIGP MRMPYEKMIQ IVDITSKLVS TALSHSK