Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0909 |
Symbol | hrcA |
ID | 4689550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 962077 |
End bp | 963090 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639833906 |
Product | heat-inducible transcription repressor |
Protein accession | YP_981147 |
Protein GI | 121603818 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.427859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATA GTCGCGCACG TTTGTTACTC AAGGCGCTCG TTGAGCGCTA TATTGCCGAT GGCCAGCCGG TCGGTTCGCG CACGCTGTCC AAGGCTTCCG GCCTGGAGTT GTCGCCCGCC ACGATCCGCA ATGTGATGAG CGACCTGGAA GACCTGGGCC TGATTGTCAG CCCGCACACC TCTGCTGGCC GCATTCCCAC CGCACGGGGC TATCGCCTGT TTGTCGATAC GATGCTGACC ACGCAGCGCG ACCCGTTTTC GGTCGCTGGG CAAATGGCCC GGATTGCACC GGACCAGCCA CTCAAGGTCA TCAGCAACGC AGCCCACATG CTCTCCAGCC TGTCGCAGTT CGTTGGCGTG GTGATGGCGC CGCGCCGCAC CTCGGTGTTC CGGCATATCG AGTTCTTGCG GCTGTCCGAA AAGCGTTTTC TGGTGATCAT TGTTTCACCC GATGGCGATG TGCAGAACCG GGTGATCTTT ACCGAGACCG ACTACACCGC GTCTCAATTG ATCGAGGCGT CGAACTTTCT CAACTCGCAC TACGCCGGCA TGGCGATTGA AGAGGTGCGC GAGCGGCTGA AAAATGAAGT CGAAGCGCTC AGGGGTGAAA TCGCCACCCT GATGCAGGAA GCCGTCCTGG TCAGCTCCGA AGCCATCGAG TCGCGCGATG AAGTGGTTGT CTCCGGCGAG CGCAACCTGC TGGCGGTTAG CGACTTTTCC AGCGACATGG GCAACCTTCG CAAGCTGTTT GACCTGTTCG AGCAGAAGGC GCAGCTGATG CGCCTGCTCG ATGTCTCCAG CCGCGCCGAG GGTGTGCGGA TTTACATCGG CGGCGAAAGC CAGGTGATTC CGTACCAGGA ACTGTCGGTG GTCACGGCGC CTTACGAGGT CGATGGTCAG GTCGTGGGAA CCCTGGGCGT CATTGGCCCG ATGCGTATGC CCTACGAAAA AATGATCCAG ATTGTCGATA TCACCTCCAA GCTGGTCAGC ACTGCGCTCA GCCACAGCAA ATAG
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Protein sequence | MLDSRARLLL KALVERYIAD GQPVGSRTLS KASGLELSPA TIRNVMSDLE DLGLIVSPHT SAGRIPTARG YRLFVDTMLT TQRDPFSVAG QMARIAPDQP LKVISNAAHM LSSLSQFVGV VMAPRRTSVF RHIEFLRLSE KRFLVIIVSP DGDVQNRVIF TETDYTASQL IEASNFLNSH YAGMAIEEVR ERLKNEVEAL RGEIATLMQE AVLVSSEAIE SRDEVVVSGE RNLLAVSDFS SDMGNLRKLF DLFEQKAQLM RLLDVSSRAE GVRIYIGGES QVIPYQELSV VTAPYEVDGQ VVGTLGVIGP MRMPYEKMIQ IVDITSKLVS TALSHSK
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