Gene Pnap_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0906 
Symbol 
ID4689438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp958456 
End bp959313 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID639833903 
Producthypothetical protein 
Protein accessionYP_981144 
Protein GI121603815 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.960335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGA TCCTCATCAC CGGAATGTCG GGCTCGGGAA AGTCGGTGGC GCTGCATGCG 
CTTGAAGATG CAGGCTACTA CTGCGTGGAC AACCTTCCGC CTGAGTTGCT GTCATCGTTT
GTCGCGTTAA AGCGGCCGCA CAATGCGCCC AAGCTCGCCA TCGCGATGGA TGTCAGAAGC
GCCACGTCCC TGCCACTGGT GCCGGAGCAG CTCCGGGAAT TGAAGGCTCA AGGCATGGCC
GTGCAATCAC TTTTCCTGGA TGCCAATACC GACACCCTGG TGCGGCGTTT TTCAGAAACA
CGGCGGCTCC ATCCACTGTC ACGAATAGAT GCCACCGACC AGCACCGGGC ACTGGTCGAT
GCCATCGAAC TGGAGCGCAA CCTGCTGGGC GACATGCGCG AGCAGGCGCA CGTCATTGAC
ACCAGCATGA TCCGCGCGGC GCAGCTGCAG GGCTACGTGA AATCACTGCT GCAAAACCCG
AGCCGCCAGT TGACGCTGGT GTTTGAGTCT TTTGCCTTCA AGCGCGGCGT GCCGCTCGAT
GCCGATTATG TGTTTGATGT GCGCATGCTT CCCAACCCTC ATTACGAGGC AGACCTGCGG
CATCAGACCG GACTCGACCA GCCGGTTGCC GACTTCCTGA AGGCCCATTC AGAAGTGGAC
GACATGTTCA GGCACATCGA GCAATTCCTC AGCCACTGGC TGCAGGCGCT GGTGCGTGAT
CACCGCAGTT ACGTCACGGT GGCGGTGGGC TGCACCGGTG GCCAGCACCG TTCGGTTTAC
CTGGTTGAAG CGCTGGCGGC AGCCTTTGGC AAGGACTGGC CGACCCTGAA ACGGCACCGC
GAACTCGAAG CCGGCTGA
 
Protein sequence
MEMILITGMS GSGKSVALHA LEDAGYYCVD NLPPELLSSF VALKRPHNAP KLAIAMDVRS 
ATSLPLVPEQ LRELKAQGMA VQSLFLDANT DTLVRRFSET RRLHPLSRID ATDQHRALVD
AIELERNLLG DMREQAHVID TSMIRAAQLQ GYVKSLLQNP SRQLTLVFES FAFKRGVPLD
ADYVFDVRML PNPHYEADLR HQTGLDQPVA DFLKAHSEVD DMFRHIEQFL SHWLQALVRD
HRSYVTVAVG CTGGQHRSVY LVEALAAAFG KDWPTLKRHR ELEAG