Gene Pnap_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0905 
Symbol 
ID4689165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp957301 
End bp958455 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content62% 
IMG OID639833902 
ProductA/G-specific adenine glycosylase 
Protein accessionYP_981143 
Protein GI121603814 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACG AATCAAACCA TGGCGACATG CTTCAAGCAG GCAGCCAGCC CATGCTGAAA 
TCCTTCCCTC CTTCACTGTT TGCCAATGAA ATCGTACGCT GGCAGCAGAG CCATGGGCGC
AACAGCCTGC CCTGGCAAAA CACACGCGAT CCTTACCGGG TCTGGCTGTC GGAAATCATG
CTCCAGCAGA CCCAGGTCGC CACGGTGCTG GCGTATTACG ACCGATTTGT GCAGCGCTTT
CCCACGGTCA GCGACCTGGC CGCTGCGACG CAGGACGAGG TGATGGCCTT GTGGGGCGGG
CTGGGCTACT ACAGCCGCGC ACGCAACCTG CATCGCTGCG CGCAAGACGT GATGGCGCTG
CATGCCGGGC AGTTTCCACG CTCGGCGGAG CAGTTGCAGA CCTTGCCTGG CATCGGCCGC
TCAACGGCTG CGGCCATCGC TTCATTCTGC TTTGCAGAGC GGGTTGCGAT CCTCGACGGG
AACGTCAAAC GGGTGCTCAC GCGGGTGCTT GGTTTTTCTG ACGATCTGGC ACAAAGCGCC
AATGAGCGTG CGCTCTGGAA TCAGGCCACA GACCTGCTGC CTCATGACAA TCTTGCCCGG
GCCATGCCGC GTTACACCCA GGGGCTGATG GACCTTGGCG CCACGATCTG CACGGGCCGG
CAGCCAAAAT GCCTGCTGTG TCCGGTGCAG GCGCTGTGCC GTGGACGGGC AGAGGGGCAG
CCTGAGAAAT ATCCGGTCAA GACCCGAAAA CTCAAGCGTA GCACCCAGGC GCTGAGCCTG
TTGTGGGCAC AAAAGCCCGA CGGTTCGGTA TGGCTCGAAA AGCGCCCTGC GACAGGCATC
TGGAGCGGCC TTTATTGCCT GCCCGTGTTT GAAAGCGATG CCGAACTCAG GGCGCTCGTA
CCGCAAAGCC TTGAAGGCCG GATGGAGGCA TTGCCAGCAT TCGTCCATGT CCTGACTCAC
AAGGATCTGT GCCTGTCGCC GTGGATTGCC GGTTTCCAGG CTGATCAGGC CATGCCCGAA
ACAATGGTTT CAGAGGGCCG TCCGGCGGCA TGGTTCGGCC CGGCGGCATG GCCGGAGTTG
GGCCTGCCTG CGCCCATTCG CAAGCTGCTG GTGCGGGATG CGCCGGGCCT GGCGGGCAAT
GACGAGCTTG GCTGA
 
Protein sequence
MPNESNHGDM LQAGSQPMLK SFPPSLFANE IVRWQQSHGR NSLPWQNTRD PYRVWLSEIM 
LQQTQVATVL AYYDRFVQRF PTVSDLAAAT QDEVMALWGG LGYYSRARNL HRCAQDVMAL
HAGQFPRSAE QLQTLPGIGR STAAAIASFC FAERVAILDG NVKRVLTRVL GFSDDLAQSA
NERALWNQAT DLLPHDNLAR AMPRYTQGLM DLGATICTGR QPKCLLCPVQ ALCRGRAEGQ
PEKYPVKTRK LKRSTQALSL LWAQKPDGSV WLEKRPATGI WSGLYCLPVF ESDAELRALV
PQSLEGRMEA LPAFVHVLTH KDLCLSPWIA GFQADQAMPE TMVSEGRPAA WFGPAAWPEL
GLPAPIRKLL VRDAPGLAGN DELG