| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0902 |
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| Symbol | |
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| ID | 4688679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 952524 |
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| End bp | 954401 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833899 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_981140 |
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| Protein GI | 121603811 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.285036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG GGCCGCCAGT TCGGTGCAGG GTGTACGACA AACGCAAAGC ATCGTGCGGA
AGCTTCAATT ATCATGGTCC GATGAAGAAA AAACTTGGCC TTGCATTTGC CTGCCTGTGG
CTTGCCGCTC CGCTGGTACT GGCGCAGGCC GCGATGCCTG AATCCCCTGC CCCTGTCAAA
CCTGCCGAGA CTTCGGGACT CGCCCAGGCC AAGGCGGCGC AGGACTCCGC GCCGCTGTCG
TTGCTCGACA GCGAACTGTT TTATGAATTG CTGGTCGGCG AAATCACGGC CCAGGAAGGT
GAACCTGCGG CAGGCTTTGC CTTGATGCTG GACGCCGCCC GAAAAACCGG CGATGCCCAG
TTGTACCAGC GGGCCACCGA TATCGCCCTG CAGGCACGCT CGGGGGACGC CGCACTGCAG
GCGGCGCTCG CCTGGAAACA ACAGCTGCCC GCGTCGCGTG AAGCCAACCG CTATGTGCTG
CAGATCCTGA TTGCACTGAA CCGCATCGCC GACACGCTGG AGCCCTTGAA GACGGAGATC
AGGATGGCGT CCGATACAGA GCGCGTCGCG GTACTCACAG CCGCTCCGCG CGCCTATGCC
CGTGCCAGTG ACCGCAAACT GGCAGCCAGC GTGGTGGAAT CCGCGCTCGC CGACTACCTG
GCCGATCCCG CCACCGCCAG CGCAGCCTGG ACCACGGCCG GACGCATGCG ACTGGCTGCG
GACGACAGGG AAGGCGCCCT TGAGGCCGCC AGGCGCGGCC AGGCCGCCGA CCCGCGCGCG
GAAGGCCCGG CCGTGGTGGC GCTGGAATTG ATGGACCCGA AACGGCCTGA AGCCGAAGCA
CTGGTCAACA ACTACCTCAA TGACCGTGAA AGCACGTCCA AGGCGCTGCC TGAAATCCGC
ATGGCTTATG CCCGGGTGTT GCTTGACGCA CAGCGCTATG CCGAAGCAAC TGCACAACTG
AAGATCGTGA CGCGTGACAA GCCCGACTAC CCGGAGGGCT GGCTGGTGCT GGGCTCACTG
CAGATGCAGG ACCACCAGCC TGCCGCAGCG CAGGCTTCGC TGGAACGCTA TATCACGCTG
GTCCAGCAAA CCCCACAGAC CGAACGCAAC CCCGGCCTGG CCCAGGCCTA TCTCTCGCTT
TCGCAACTGG CCGAAAAGCG CAAGGACTAT GCAGCAGCGG AAAACTGGCT CAACAAGATT
GAAAACTCTT CGGACCTGGC GCAGGCGCAA ACCCGCCGCG CCTCGATTCT CGCCAGCCAG
GGCAAGCTGG AGGAAGGCCG GCGCCTGATT CGCCAATTGC CCGAACGCAC GCCCGAGGAA
GCGCGCCTGA AACTCAATGC CGAAGTCGGC TTGCTGCGGG AGTTCAAGCA ATACCGCCAG
GCCCATGAGT TGCTGGCCCA GGCGCTGGCA AAGGCACCAG AAGACACCGA CCTGCTTTAC
GAGCAATCAA TGGTGGCTGA AAAGCTCGGC TCGCTCGACG AGATGGAGCG CCTGCTTCGC
CAGATCATCC GGCTCAAGCC AGACTATCAC CACGCCTACA ACGCCCTGGG CTATTCGCTG
GCCGACCGCA ATGTGCGCCT GCCCGAAGCG CGTGAACTGA TTCGCAAGGC GATTGAGCAT
GCGCCGGCTG ACCCGTTCAT CAAGGACAGC CTGGGCTGGG TTGAATTCCG CATGGGCAAC
AAGCTGGAAG CGGCGCAAAT TTTCGAGGCA GCCTACAAGG CCAGGCCCGA TGCCGAGATT
GCCGCGCATT TCGGTGAAGT GCTGTTGAGC CTGGGCCAGC GCGACCGCGC CCTGGCCATC
TGGAAAGAAG GTCTACTCCT CAATGCCGAC AACGAAACCC TGCTTGAGAC GCTCAAACGC
CTCAATGTCA AGCCGTAA
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| Protein sequence | MRKGPPVRCR VYDKRKASCG SFNYHGPMKK KLGLAFACLW LAAPLVLAQA AMPESPAPVK
PAETSGLAQA KAAQDSAPLS LLDSELFYEL LVGEITAQEG EPAAGFALML DAARKTGDAQ
LYQRATDIAL QARSGDAALQ AALAWKQQLP ASREANRYVL QILIALNRIA DTLEPLKTEI
RMASDTERVA VLTAAPRAYA RASDRKLAAS VVESALADYL ADPATASAAW TTAGRMRLAA
DDREGALEAA RRGQAADPRA EGPAVVALEL MDPKRPEAEA LVNNYLNDRE STSKALPEIR
MAYARVLLDA QRYAEATAQL KIVTRDKPDY PEGWLVLGSL QMQDHQPAAA QASLERYITL
VQQTPQTERN PGLAQAYLSL SQLAEKRKDY AAAENWLNKI ENSSDLAQAQ TRRASILASQ
GKLEEGRRLI RQLPERTPEE ARLKLNAEVG LLREFKQYRQ AHELLAQALA KAPEDTDLLY
EQSMVAEKLG SLDEMERLLR QIIRLKPDYH HAYNALGYSL ADRNVRLPEA RELIRKAIEH
APADPFIKDS LGWVEFRMGN KLEAAQIFEA AYKARPDAEI AAHFGEVLLS LGQRDRALAI
WKEGLLLNAD NETLLETLKR LNVKP
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