Gene Pnap_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0894 
Symbol 
ID4688846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp946528 
End bp947202 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID639833890 
Productputative methyltransferase 
Protein accessionYP_981132 
Protein GI121603803 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.114328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA CACCCAAACC CATCGCCCCC GAGCCAGCCG CCAAGCCTTC GGCCAAGGCC 
AACACCATCA AGCCCAAGGG CACCGCGCAC CTCAAGCCGC CCGGCGAAAT CCGCATCATC
GGCGGGCAGT ACCGGCGCAC CAAGCTCACC GTGCCGAATC ACCCCGGCTT GCGCCCCACG
CCCGACCGCG TGCGCGAAAC GCTGTTCAAC TGGCTGGGCC AGGATCTGAC CGGCTGGCGC
TGCGCCGACG TGTTTGCCGG CACCGGCGTG CTGGGTTTCG AGGCCGCTTC GCGCGGCGCC
GCCGACGTGC TGCTGTGCGA GCAGGACCCG GGGCTGGTCG TGCAGCTCAA GGCGGTGCAG
GCCAGGCTCA AGGCCAGCAT GGTGCGGATT GAGCGCGGCG ACGGGCTGAG CGCGCTCAAG
CGGCTGGAAG CCGGCAGCAT GCAGCTGGTG CTGATCGATC CGCCTTTTGA CTCCGGCGTG
TTCGAAGCGG CGCTCAAGGC CGCTGCCCAG GCGATCAGCC CGACCGGCCT GGTGTACCTG
GAGGCGCCCA AAGCCTGGCA GGACGAGGAA TTGCTGCCGC TGGGCCTGAG AATCCACCGC
AGCGCCAAGG CAGGCGCGGT GCATTTTCAC CTGCTGGTCA AGAGCGAGCT GTTGCCAGAG
CCGCTGCCCG CCTGA
 
Protein sequence
MKYTPKPIAP EPAAKPSAKA NTIKPKGTAH LKPPGEIRII GGQYRRTKLT VPNHPGLRPT 
PDRVRETLFN WLGQDLTGWR CADVFAGTGV LGFEAASRGA ADVLLCEQDP GLVVQLKAVQ
ARLKASMVRI ERGDGLSALK RLEAGSMQLV LIDPPFDSGV FEAALKAAAQ AISPTGLVYL
EAPKAWQDEE LLPLGLRIHR SAKAGAVHFH LLVKSELLPE PLPA