Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0894 |
Symbol | |
ID | 4688846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 946528 |
End bp | 947202 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639833890 |
Product | putative methyltransferase |
Protein accession | YP_981132 |
Protein GI | 121603803 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.114328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACA CACCCAAACC CATCGCCCCC GAGCCAGCCG CCAAGCCTTC GGCCAAGGCC AACACCATCA AGCCCAAGGG CACCGCGCAC CTCAAGCCGC CCGGCGAAAT CCGCATCATC GGCGGGCAGT ACCGGCGCAC CAAGCTCACC GTGCCGAATC ACCCCGGCTT GCGCCCCACG CCCGACCGCG TGCGCGAAAC GCTGTTCAAC TGGCTGGGCC AGGATCTGAC CGGCTGGCGC TGCGCCGACG TGTTTGCCGG CACCGGCGTG CTGGGTTTCG AGGCCGCTTC GCGCGGCGCC GCCGACGTGC TGCTGTGCGA GCAGGACCCG GGGCTGGTCG TGCAGCTCAA GGCGGTGCAG GCCAGGCTCA AGGCCAGCAT GGTGCGGATT GAGCGCGGCG ACGGGCTGAG CGCGCTCAAG CGGCTGGAAG CCGGCAGCAT GCAGCTGGTG CTGATCGATC CGCCTTTTGA CTCCGGCGTG TTCGAAGCGG CGCTCAAGGC CGCTGCCCAG GCGATCAGCC CGACCGGCCT GGTGTACCTG GAGGCGCCCA AAGCCTGGCA GGACGAGGAA TTGCTGCCGC TGGGCCTGAG AATCCACCGC AGCGCCAAGG CAGGCGCGGT GCATTTTCAC CTGCTGGTCA AGAGCGAGCT GTTGCCAGAG CCGCTGCCCG CCTGA
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Protein sequence | MKYTPKPIAP EPAAKPSAKA NTIKPKGTAH LKPPGEIRII GGQYRRTKLT VPNHPGLRPT PDRVRETLFN WLGQDLTGWR CADVFAGTGV LGFEAASRGA ADVLLCEQDP GLVVQLKAVQ ARLKASMVRI ERGDGLSALK RLEAGSMQLV LIDPPFDSGV FEAALKAAAQ AISPTGLVYL EAPKAWQDEE LLPLGLRIHR SAKAGAVHFH LLVKSELLPE PLPA
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