Gene Pnap_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0892 
Symbol 
ID4688842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp943645 
End bp945144 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content69% 
IMG OID639833888 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_981130 
Protein GI121603801 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.12862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC CCAAGCCAAT TTTCGTCAAG CCCCGAGTAT TCCTTTCGAT GCGCCTGGCG 
GGCCGTTTTG CAGCCGTGCT GCCTGCTGCG CTGATGGCCT GCGTCAGCCC TGTGGTCTTC
GCTCAGGCGC CGATACCGGT GGAGCAGTTC ACGCTGGCCA ACGGCCTGAC CGTCATCGTC
AAGCCCGACC ACCGGGCGCC GACCGTGGCC CACATGCTGT GGGTGCGGGT CGGCTCGATG
GACGAGGTCG ATGGCACGTC GGGCGTGGCG CATGCGCTGG AGCACATGAT GTTCAAGGGA
ACGCCGAAGG TCAAGGCCGG TGAATTCTCC AGGCGCGTGG CGGCGCTGGG CGGCCAGGAA
AACGCCTTCA CCGGCCGCGA CAACACCGGC TACTACCAGC AGATTCCGGC CGGCAGGCTC
GAAGACGTGA TGCGGCTAGA GGCCGACCGC TTTGCCCACA GCCAGTGGCC TGACGACGAA
TTCAGGCGCG AGATCGAGGT CGTCAAGGAA GAGCGCCGGA TGCGCACCGA GGAATCGCCC
CACGCCATGC TGCATGAGCA GGCCAGCGCC GTCACCTTTC TGGCCTCGCC CTATCGCCGT
CCCATCGTCG GCTGGATGAG CGACCTCGAC GCGATGACGC CGGGCGACGT GCGCAGCTTC
TACCAGCGCT GGTACGTGCC GGCCAACGCC GCGCTGGTGG TGGCCGGCGA TGTCGAGGTG
GCGCGGGTCA AGAAGCTGGC CGAGAAATAC TACGGTCCCA TTGCCGCGCG CCCGGTGCCC
GAGCGCAAGC CGCGCAGCGA GCCCGAACAG GCCGGCATGC GCCGCATCGA CCTCAAGGCG
CCGGCCAGCC AGGCTTACGT CAGCATGGCC TTCAAGGTGC CCAAGATCGC GGCGGCGGAT
CTGGCACCAG CACCCGGCGC CGCGTCGCCG ACGCTTGCCG CCAGCCGCGA CGCCCTGGCG
CTGACGGTGC TGTCGGCCGT ACTCGACGGC TACAGCGGCG CCCGGCTGGA ACGCGCGCTG
GTGCAGGGCC AGGGCCAGGC GGGCGGGCGC GTGGCCGACA GCGCTGACGC TTCCAGCGGC
CTGTTTGGCC GGGGGCCGCA GCTGTTCACG CTCGACGGCG TTCCTGCCGC CGGCAAGACC
ACGCAGCAGG TGGCCGATGC CCTGCGCCAG CAGGTCGCGC TGGTGGCGCA GGGCGGCGTG
AGCGAGGCCG AACTCCAGCG CGTCAAGACC CAGTGGGTCG CCAGCGAAAC CTACAAGCTC
GACTCGGTGT TCAGCCAGGC GCGCGAACTC GGCTCCAACT GGGTCCAGGG CCTGCCGCTG
GATGCCAGCG CGCGTCTGAT TGCCCAGCTG CGCACGGTGA CGGCCGGCGA AGTGCAGGCC
GTGGCCGCCA AATATTTCGG CGATGACCAG ATGACCCTTT CAACCCTGCT GCCCCAGCCC
ATGGACCCGA ACCGCAAGCC GCGTCAGCCG AGCGCGCCGG CCAGCGGTGA CCTGCATTGA
 
Protein sequence
MKHPKPIFVK PRVFLSMRLA GRFAAVLPAA LMACVSPVVF AQAPIPVEQF TLANGLTVIV 
KPDHRAPTVA HMLWVRVGSM DEVDGTSGVA HALEHMMFKG TPKVKAGEFS RRVAALGGQE
NAFTGRDNTG YYQQIPAGRL EDVMRLEADR FAHSQWPDDE FRREIEVVKE ERRMRTEESP
HAMLHEQASA VTFLASPYRR PIVGWMSDLD AMTPGDVRSF YQRWYVPANA ALVVAGDVEV
ARVKKLAEKY YGPIAARPVP ERKPRSEPEQ AGMRRIDLKA PASQAYVSMA FKVPKIAAAD
LAPAPGAASP TLAASRDALA LTVLSAVLDG YSGARLERAL VQGQGQAGGR VADSADASSG
LFGRGPQLFT LDGVPAAGKT TQQVADALRQ QVALVAQGGV SEAELQRVKT QWVASETYKL
DSVFSQAREL GSNWVQGLPL DASARLIAQL RTVTAGEVQA VAAKYFGDDQ MTLSTLLPQP
MDPNRKPRQP SAPASGDLH