| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0889 |
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| Symbol | |
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| ID | 4688799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 940820 |
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| End bp | 941788 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833885 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_981127 |
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| Protein GI | 121603798 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0236612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATG CCCTTTCCCC CAAGTCGATG ATGTCCGTCG CGGTTGCGCC TGCTGCGTCA
AACACCGCCG TGGCCGCCAT CAACCCTTGG GCTATGGTGC CTCCGCTGGG CAATCTGGAC
GCTTATATTT CGGCCGTCAA CCGCCTGCCC ATGCTCACCC TGGAGCAGGA GCAGGAGTTT
TCCAAAAAGC TCAAAGAGAA CAATGACCTG GACTCGGCCG GCAAGCTGGT GCTGTCTCAC
CTGCGGCTGG TGGTGTCGAT TTCGCGCAAG TACCTGGGCT ATGGCCTGCC CCACGGCGAC
CTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCGGTCA AGCGCTTCGA CCCTGACCAG
AACGTGCGCC TGGTGAGCTA CGCCATGCAC TGGATCAAGG CCGAAATTCA CGAATACATC
CTGAAAAACT GGCGCATGGT CAAGGTCGCC ACGACCAAGG CCCAGCGCAA GCTGTTTTTC
AATCTGCGCT CGATGAAACA GGGTTACAAG GACGACGCCG ACGTGGCGAC GCACCGCGAC
ACCCTGACCG AAAGCCAGAT TGACTCGATG GCCAGGACGC TGAACGTCAA GCGCGAGGAA
GTCATCGAGA TGGAGCAGCG CATGTCCGGC GGCGACGTGC TGCTGGACCC GAGCCCGAAC
GACGATGGCG ATGATGCCTT TGGTCCGATT GCCTACCTGG CCGATGCCGC GCAGGAGCCG
ACGGCCCTGA TGGAATCGCG CGAGCGTGAT GACCTCATGA CCGATGGCCT GAGCACCGCC
CTGCAGGAAC TCGACCCGCG CGCACGCCGC ATTGTGGAAG AGCGCTGGCT CAATGTGAAC
GATGACGGTT CGGGCGGCAT GACGCTGCAC GACCTGGCGG CCGAATACAA GGTCAGCGCC
GAGCGCATTC GCCAGATTGA GGTGGCGGCT ATGAAGAAAA TGAAAAAGGT GCTGGCGACC
TACGCCTGA
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| Protein sequence | MSYALSPKSM MSVAVAPAAS NTAVAAINPW AMVPPLGNLD AYISAVNRLP MLTLEQEQEF
SKKLKENNDL DSAGKLVLSH LRLVVSISRK YLGYGLPHGD LIQEGNIGLM KAVKRFDPDQ
NVRLVSYAMH WIKAEIHEYI LKNWRMVKVA TTKAQRKLFF NLRSMKQGYK DDADVATHRD
TLTESQIDSM ARTLNVKREE VIEMEQRMSG GDVLLDPSPN DDGDDAFGPI AYLADAAQEP
TALMESRERD DLMTDGLSTA LQELDPRARR IVEERWLNVN DDGSGGMTLH DLAAEYKVSA
ERIRQIEVAA MKKMKKVLAT YA
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