Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0887 |
Symbol | |
ID | 4688750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 939203 |
End bp | 940123 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639833883 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_981125 |
Protein GI | 121603796 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCA GTCCTCCGTC TGCCGCTGCT ACTCCATCCA GCGCCCGCGC TCCGTCACGC TTCAGCCAGT TTTACGCGCT GACCAAACCA CGCGTCGTGC AGCTCATCGT GTTTTGCGCG CTGATCGGCA TGGTGCTGGC CGTGCCGGGC GTGCCGACCT GGCTTGATGT CCGGCTCGCC CTGATCGCCT GTGCAGGCAT CTGGCTGGTG GCCGGCGCGG CTGCGGCCTT CAACTGCCTG GTCGAGCAGC AAATTGACGC CAAGATGCGG CGCACCGCCT GGCGACCGAC GGCCCGGGGG CAGCTCAGCA ACCCCCTGAC GCTGGCTTTT TCCGCCGGAC TGTGCGCTCT GGGCTCATGG GTTTTGTATG TCTGGGTCAA TCCACTGACC ATGTGGCTGA CCTTTGCCAC CTTTGTCGGC TATGCGGTGG TGTACACCGT GATCCTCAAG CCGCTGACGC CGCAAAACAT CGTCATCGGC GGCGCCTCGG GCGCGATGCC GCCAGTGCTG GGCTGGGCCG CCATGACCGG CTCGGTCGGG CCTGAAGCGC TGATTCTGTT CCTGATCATT TTCCTGTGGA CGCCGCCGCA CTTCTGGGCG CTGGCACTCT ACCGCGTCGA GGACTACCGC AAGGCCGGCC TGCCGATGCT GCCCGTCACC CACGGCAACG AATTCACGCG GCTGCAGGTG TTTTTGTACA CCTTGGTGCT GTTTCCCGCC TGCCTGATGC CCTTCATCTT CAAGATGAGC GGCTGGCTGT ACCTGGTGGC GGCGGTGCTG CTCAGCATCG GCTTCAGCGG CCATGCCTGG TGCCTGTGGC GCAATTACTC CGATGCGCTG GCACGCAAGA CCTTCCGCTT TTCGCTGATT CACCTGTCGG CCTTGTTTGC AGCGCTGCTG CTGGACCACT ACCTGATATG A
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Protein sequence | MNPSPPSAAA TPSSARAPSR FSQFYALTKP RVVQLIVFCA LIGMVLAVPG VPTWLDVRLA LIACAGIWLV AGAAAAFNCL VEQQIDAKMR RTAWRPTARG QLSNPLTLAF SAGLCALGSW VLYVWVNPLT MWLTFATFVG YAVVYTVILK PLTPQNIVIG GASGAMPPVL GWAAMTGSVG PEALILFLII FLWTPPHFWA LALYRVEDYR KAGLPMLPVT HGNEFTRLQV FLYTLVLFPA CLMPFIFKMS GWLYLVAAVL LSIGFSGHAW CLWRNYSDAL ARKTFRFSLI HLSALFAALL LDHYLI
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