| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0887 |
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| Symbol | |
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| ID | 4688750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 939203 |
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| End bp | 940123 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833883 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_981125 |
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| Protein GI | 121603796 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCA GTCCTCCGTC TGCCGCTGCT ACTCCATCCA GCGCCCGCGC TCCGTCACGC
TTCAGCCAGT TTTACGCGCT GACCAAACCA CGCGTCGTGC AGCTCATCGT GTTTTGCGCG
CTGATCGGCA TGGTGCTGGC CGTGCCGGGC GTGCCGACCT GGCTTGATGT CCGGCTCGCC
CTGATCGCCT GTGCAGGCAT CTGGCTGGTG GCCGGCGCGG CTGCGGCCTT CAACTGCCTG
GTCGAGCAGC AAATTGACGC CAAGATGCGG CGCACCGCCT GGCGACCGAC GGCCCGGGGG
CAGCTCAGCA ACCCCCTGAC GCTGGCTTTT TCCGCCGGAC TGTGCGCTCT GGGCTCATGG
GTTTTGTATG TCTGGGTCAA TCCACTGACC ATGTGGCTGA CCTTTGCCAC CTTTGTCGGC
TATGCGGTGG TGTACACCGT GATCCTCAAG CCGCTGACGC CGCAAAACAT CGTCATCGGC
GGCGCCTCGG GCGCGATGCC GCCAGTGCTG GGCTGGGCCG CCATGACCGG CTCGGTCGGG
CCTGAAGCGC TGATTCTGTT CCTGATCATT TTCCTGTGGA CGCCGCCGCA CTTCTGGGCG
CTGGCACTCT ACCGCGTCGA GGACTACCGC AAGGCCGGCC TGCCGATGCT GCCCGTCACC
CACGGCAACG AATTCACGCG GCTGCAGGTG TTTTTGTACA CCTTGGTGCT GTTTCCCGCC
TGCCTGATGC CCTTCATCTT CAAGATGAGC GGCTGGCTGT ACCTGGTGGC GGCGGTGCTG
CTCAGCATCG GCTTCAGCGG CCATGCCTGG TGCCTGTGGC GCAATTACTC CGATGCGCTG
GCACGCAAGA CCTTCCGCTT TTCGCTGATT CACCTGTCGG CCTTGTTTGC AGCGCTGCTG
CTGGACCACT ACCTGATATG A
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| Protein sequence | MNPSPPSAAA TPSSARAPSR FSQFYALTKP RVVQLIVFCA LIGMVLAVPG VPTWLDVRLA
LIACAGIWLV AGAAAAFNCL VEQQIDAKMR RTAWRPTARG QLSNPLTLAF SAGLCALGSW
VLYVWVNPLT MWLTFATFVG YAVVYTVILK PLTPQNIVIG GASGAMPPVL GWAAMTGSVG
PEALILFLII FLWTPPHFWA LALYRVEDYR KAGLPMLPVT HGNEFTRLQV FLYTLVLFPA
CLMPFIFKMS GWLYLVAAVL LSIGFSGHAW CLWRNYSDAL ARKTFRFSLI HLSALFAALL
LDHYLI
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