Gene Pnap_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0882 
Symbol 
ID4688767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp935197 
End bp936078 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content60% 
IMG OID639833878 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_981120 
Protein GI121603791 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAG CAATCCACGG GGCAACCCCT TACTATTTTG TGCCCGGCCC TTCGCGGCAC 
CCGGTCATGG CCGCCATCGG CTTGTTTTTT GTGATTCTGG GCGCCAGCCA GTGGATCAAT
GGCGCCGGAT GGGGCGCCTG GTCGCTGGCC TTTGGCATGC TGTTCTGGCT CGGCACGCTG
TTCCAGTGGT TCCGTGACTC GATTGCCGAA AGCGAAGGCG GCCTGTATGG CCACAGGGTT
GACCTGTCCT ACCGCTGGAG CATGAGCTGG TTCATTTTCT CGGAAGTCAT GTTTTTCGGC
GCGTTTTTCA CCGCCCTGTG GTGGGCGCGC TCGCATTCGC TGCCAGCGCT CGGGAGCCTG
GACAATGCCT TGCTCTGGCC TGACTTCAAG GCGGTCTGGC CCAGCCTGGC GGCCGGGGTG
ACCGGATCGC CGGCCGACAT CATCGAGCCG TTCACGACCA TGACGCCGTT CTGGCTGCCG
ACCATCAACA CGGCCCTGCT GCTCAGCTCG GGCGTGACCC TGACGATTGC CCACCATGCC
CTGCGCGAAA ACCACCGGGG CCGCACCATT GCCTTCATGT GGATGACGGT GCTGCTGGGC
ATCACGTTTT TGACGGTGCA GGGCTATGAA TACTTCCATG CCTATTCCGA ACTCAACCTG
AAGCTGACCT CGGGTGTGTA TGGCTCGACG TTTTACATGC TGACGGGTTT TCACGGCTTT
CATGTGCTGA TCGGCATGCT GATGCTGCTG GTCATCACGC TGCGCCTGCA AAAAGGCCAT
TTCACCGCCG ACAAGCATTT TGGCTTTGAA GGCGCGGCCT GGTACTGGCA CTTTGTGGAC
GTGGTGTGGC TGGGTCTTTA CATCACGGTT TACTGGCTAT AA
 
Protein sequence
MSAAIHGATP YYFVPGPSRH PVMAAIGLFF VILGASQWIN GAGWGAWSLA FGMLFWLGTL 
FQWFRDSIAE SEGGLYGHRV DLSYRWSMSW FIFSEVMFFG AFFTALWWAR SHSLPALGSL
DNALLWPDFK AVWPSLAAGV TGSPADIIEP FTTMTPFWLP TINTALLLSS GVTLTIAHHA
LRENHRGRTI AFMWMTVLLG ITFLTVQGYE YFHAYSELNL KLTSGVYGST FYMLTGFHGF
HVLIGMLMLL VITLRLQKGH FTADKHFGFE GAAWYWHFVD VVWLGLYITV YWL