| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0878 |
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| Symbol | |
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| ID | 4688736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 931255 |
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| End bp | 932460 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639833874 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_981116 |
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| Protein GI | 121603787 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA GCAACACCAT GAGCAAATTG ACACGGCTTG GCTTACAGCA TGCAGGCACC
ATCGGGGTCT CTGCGGCGGC CTGGCTAAGC ACGGCCGCTT ACGCTGTCAA TGATCTGGCT
GGCGGGCCGG CGGTCAATCA ACTCAACCTA CATCCGGCAG CCACCCGCAT TGCCCAAGAG
CAGCACTGGC TGCACTGGTT CATGATGATC ATCTGCGTCT TGATCTTCGT GGCCGTCTTC
GGCGTGATGT TTTATTCCAT CCTGAAGCAC CGCAAGTCGC TCGGCCACAA GGCTGCCAAC
TTTCATGAAT CCACGGTCGT GGAAATCGCC TGGACGATTG TTCCTTTTGT CATCGTGATC
GGCATGGCAC TGCCTGCCAC CAAGGTGCTG GTTGCGCAGA AAGACACCAC CGGCGCCGAC
CTGACGATCA AGGCCACCGG CATCCAGTGG AAATGGGGCT ACGACTACCT CAAGGGCGAG
GGCGAAGGTA TCGGTTTTGT CTCGACCCTC GACAACGACC AGCGCCTGAT GTCCAACAAC
GGCGGTCCCA AGGCCGGTGA AACAGCGCCT GACAATTACC TGCTCAAGGT GGACAACCCG
CTGGTGGTTC CGGTCAACAA GAAAATCCGC ATCATCACCA CGGCCAACGA CGTGATTCAC
GCCTTCGCCG TGCCGGCTTT CGGCATCAAG CAGGATGCGA TTCCCGGTTT TGTGCGCGAC
ACCTGGTTCA AGGCTGAAAA AGTCGGCGAC TTCTACGGCC AGTGCCAGGA ACTCTGCGGC
AAGGAACACG CCTACATGCC GATCCATGTG AAGGTGGTTT CCGCCCAGGA TTACAGCGCA
TGGGTTGCCG TCAAGGCCAA GGAAGCCGCA GCCCTGGCCG ATGATCCGGC GAAAGTCTGG
ACGCTGGTGG ACCTCAAGGC CCGTGGCGAA AAGGTTTATG CCGCCAACTG CGCCGCCTGC
CACCAGGCCA ACGGCAAGGG CGCCGGTCCG ATCAAGCCGC TGGACGGCTC GGCCATCGTG
CTGGACAAAG ACCATGGCAA GCAAATTCAG ACCGTCCTCA ATGGTGCCGC CGCAGGAGCC
ATGCCGTCGT GGAAAGCCCT GAGCGACACC GATCTGGCAG CAGTCATCAG CTACACCAAG
AACAACTGGT CCAACCAGAC CGGCCAGATC GTTCAGCCTG CCGAGATTCT GGCTGCACGC
AAGTAA
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| Protein sequence | MNLSNTMSKL TRLGLQHAGT IGVSAAAWLS TAAYAVNDLA GGPAVNQLNL HPAATRIAQE
QHWLHWFMMI ICVLIFVAVF GVMFYSILKH RKSLGHKAAN FHESTVVEIA WTIVPFVIVI
GMALPATKVL VAQKDTTGAD LTIKATGIQW KWGYDYLKGE GEGIGFVSTL DNDQRLMSNN
GGPKAGETAP DNYLLKVDNP LVVPVNKKIR IITTANDVIH AFAVPAFGIK QDAIPGFVRD
TWFKAEKVGD FYGQCQELCG KEHAYMPIHV KVVSAQDYSA WVAVKAKEAA ALADDPAKVW
TLVDLKARGE KVYAANCAAC HQANGKGAGP IKPLDGSAIV LDKDHGKQIQ TVLNGAAAGA
MPSWKALSDT DLAAVISYTK NNWSNQTGQI VQPAEILAAR K
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