Gene Pnap_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0876 
Symbol 
ID4688734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp929576 
End bp930478 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID639833872 
Productbiotin synthesis protein BioC 
Protein accessionYP_981114 
Protein GI121603785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCTCGCGTCC GCCCACGCTC GATCCGAACG CCGTCAGCCG CTGGCAGCGC 
ATTGCGCCCC TGGCTTCACC CTGGCTGCAT GAAGAAGTGG CCAGCCGCAT GCAGGACCGG
CTGCAATGGA TCAAGCTCAA ACCGCAGGCC TGGGCGGACT GGGGCGCCTT GCGCGGCGGC
ATGCAGGCGC ATGCCCAACT GGCAAAAACC TACCCTGATG CAGCATGTTT TATTGCCGAT
GTGCATGCAG GACGGGCACA GGCAGCTTCC AAAATCATAG CAAAGCCCTG GTGGAACCCC
AGCCAGTGGC GGGCCGCGCC AGTGCGTTTC GAGATGCCGC CGCCAGCCAG CGTCGATATG
CTTTGGGCCA ACATGGCGCT GCACGAATCC GCCGACCCGC AAGCCCTGCT GGCCCAGTGG
CACCAGGCCC TGAAGGTCGA TGGATTTTTG ATGTTTTCAT GCCTCGGGCC GGATACCGCC
AGGGAATTGC GTGCGCTGTA TGCCCGCCTG GGCTGGCCGC CCGCAGGCCA TGAGCTGACC
GACATGCACG ACTGGGGCGA CATGCTGGTG CAGACCGGCT TTGCCGAGCC GGTGATGGAC
ATGGAGCGCA TCACCCTGAC TTACGAAACG CCGGCCCGCC TGTTGCAGGA ACTGGCCGAG
CTGGGCCGCA ATTTTCACCC GGCGCGCTTT CCCGGCTTGC GCGGCAGGGC CTGGAAAGCG
CGGCTGGAGC AGGAGCTGGC GGCCCAGCTG ACCGGCAGCG ACGGCCGGCT GTCGCTGACG
TTTGAAGTCA TTTATGGGCA TGCCCTGAAG GCCAAGCCCA AGTTCAAGGT CAGTCCGCTC
AGCGCCGTGT CGGTCGAAGA CATGCGCCGC ATGCTGCAGG GCAGTGCCGG CCCCTTGGGT
TGA
 
Protein sequence
MTTTSRPPTL DPNAVSRWQR IAPLASPWLH EEVASRMQDR LQWIKLKPQA WADWGALRGG 
MQAHAQLAKT YPDAACFIAD VHAGRAQAAS KIIAKPWWNP SQWRAAPVRF EMPPPASVDM
LWANMALHES ADPQALLAQW HQALKVDGFL MFSCLGPDTA RELRALYARL GWPPAGHELT
DMHDWGDMLV QTGFAEPVMD MERITLTYET PARLLQELAE LGRNFHPARF PGLRGRAWKA
RLEQELAAQL TGSDGRLSLT FEVIYGHALK AKPKFKVSPL SAVSVEDMRR MLQGSAGPLG