Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0871 |
Symbol | |
ID | 4687864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 924706 |
End bp | 925743 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639833867 |
Product | ISXo7 transposase |
Protein accession | YP_981109 |
Protein GI | 121603780 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.36162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAG AAAATGCAAG AAAGCAGACG CTGGAGCAGC TTCACGAGCG GCGCAAGCAA GTCGTGAGAC TGCATAAAAG GGCAATGGGC GTCATGCAAA TTGTCTCCAT GACGGGTTTG AGCTACCCGG CTGTGCGCAG GTGCATCGAC CTGTTCGATG AGGGCGGCTG GCCAGCAATA CGACCGGCCT TGCGTGGGCG CACTCAAGGT CTGGGGCGCA CCCTGAGCCA GGCTCAGGAG GACAGCCTTC AGCGCAGCAT CATCGATCAA CGCCCTGAGC AGCTCAAGAT GGATTTTTTC CTGTGGAGCC GGGCGGCCGT AGGCCAGCTC ATCGAGCAGG AGTACGGCAT CGAGCTGCAG GTGCGCAGCG TTGGCAAGTA CCTGGCCCGC TGGGGTTTTA CGCCCCAAAA GCCCATCAGG CGAGCCTACG AACAAAGCCC TGAAGCGGTG CAGGCCTGGC TCGAAGGCGA GTACCCGGCG ATAGAGCAAC GCGCCCGCCA GGAAGGCGCT GAAATCCATT GGGGTGACGA GACGGCGCTG GTGAACACCG ATGTGCGCGG TAGAAGCTTT GCGCCTGCTG GAAAGACACC GGTGGCCAGA ACCGTGGGAG GCACCCGGCA AAAGCTCTCG ATGATTGCCA CGGTGACTAA CCAGGGGAAA ACCCGCTGGA TGATCATTGA CGATGCGTTT GACGCGGACA AGCTCATCGA ATTCCTGCGG GCACTGGTCA AGGATGCGGG CAAAAAGGTA TTTTTGATAC TGGACAACCT GCGGGTTCAT CACAGCAAAA TCGTCAAGGC CTGGGTGGCT AACCACAGGG ACGAAATTGA GCTGTTTTAT CTGCCCAGCT ACAGCCCTCA GCTCAATCCG GAGGAACGCC TCAATGCGGA TCTGAAGCAG GAGATGGGCA AACGCGTACC GGCGCGCAGC AAAGCCAAAT TACGCGATGC CGCCAACGAG CACATGGCTC TGCTCGAGCG CACGCCTGAG CGAGTTATCG CCTACTTTCA GGATCGGCGT GTTCGCTATG CCGCTTAA
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Protein sequence | MEKENARKQT LEQLHERRKQ VVRLHKRAMG VMQIVSMTGL SYPAVRRCID LFDEGGWPAI RPALRGRTQG LGRTLSQAQE DSLQRSIIDQ RPEQLKMDFF LWSRAAVGQL IEQEYGIELQ VRSVGKYLAR WGFTPQKPIR RAYEQSPEAV QAWLEGEYPA IEQRARQEGA EIHWGDETAL VNTDVRGRSF APAGKTPVAR TVGGTRQKLS MIATVTNQGK TRWMIIDDAF DADKLIEFLR ALVKDAGKKV FLILDNLRVH HSKIVKAWVA NHRDEIELFY LPSYSPQLNP EERLNADLKQ EMGKRVPARS KAKLRDAANE HMALLERTPE RVIAYFQDRR VRYAA
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