| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0867 |
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| Symbol | |
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| ID | 4688117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 920891 |
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| End bp | 922099 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639833863 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_981105 |
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| Protein GI | 121603776 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.865704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA CCCAAGCCTT TATCTGCGAC GCCATCCGCA CCCCTTTCGG CCGCTACGGC
GGCGCCCTCT CAAGCGTTCG CGCCGACGAC CTGGGCGCCA TTCCCATCCG GGCGCTGATG
GCGCGCAACC CGGACGTGGA CTGGCAGATG GTTGCCGACG TGATCTACGG CTGCGCCAAC
CAGGCGGGCG AGGACAACCG CAATGTGGCG CGCATGAGCG CCTTGCTCGC CGGGCTGCCG
CTGGAAGTGC CCGGTGGCAC GGTCAACCGC CTGTGCGGCT CGGGTTTGGA TGCCTTGGGC
ACGGCAGCGC GCGCCATCAA GTCGGGCGAA GCGGGCCTGA TGATCGCCGG CGGCGTCGAG
AGCATGAGCC GCGCGCCATT CGTCATGCCC AAGGCCGAGA GCGCCTTCAG CCGCAGCAAT
GCGGTGTATG ACACGACGAT TGGCTGGCGT TTCGTCAACA AGCTGATGAA GGCGCAGTAC
GGCGTCGATT CGATGCCCGA AACCGCCGAG AACGTCGCCA CCGATTTCAA CATCAGCCGC
CAGGACCAGG ACCAGATGGC TCTCAGCAGC CAGCTCAGGG CCGTCGCCGC GCAACAGGCC
GGCCACCTGG CGCGTGAAAT CGTCGGGGTG AGCATCCCCC AGAAAAAAGG CGATGCCATC
CTTGTGGACC AGGACGAGCA TCCGCGCGCC ACCTCGATGG ACGTGCTGGC AAAACTCAAG
CCCATCGTGC GCCCGGACGG CACTGTGACG GCGGGCAACG CCAGCGGCGT GAACGATGGC
GCCTGCGCGC TGCTGCTGGC CGATGAAGCC AGCGCCGCCA GGAACGGCTT GACGCCGCGT
GCCCGCATCG TCGGCATGGC GACGGCTGGC GTGGCGCCGC GTGTCATGGG CATCGGCCCG
GCGCCGGCGA CGCAAAAGGT GCTGGCGCTG ACGGGCCTGA CCATCGCCCA GATGGACGTG
ATCGAACTCA ACGAAGCGTT TGCCGCGCAG GGCCTGGCCG TTCTGCGCAT GCTCGGCGTG
CCGGACGACG ACCCGCGCGT CAACGCCTGG GGCGGCGCGA TTGCGCTGGG CCATCCGCTG
GGCGCCAGCG GCGCGCGCCT GGCCACCACG GCGGTCAACC GGCTGCACCA GACCGGTGGC
CGCTACGCGC TGTGCACCAT GTGCATTGGC GTGGGGCAAG GCATTGCCGT GATCCTGGAA
CGGGTGTGA
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| Protein sequence | MTITQAFICD AIRTPFGRYG GALSSVRADD LGAIPIRALM ARNPDVDWQM VADVIYGCAN
QAGEDNRNVA RMSALLAGLP LEVPGGTVNR LCGSGLDALG TAARAIKSGE AGLMIAGGVE
SMSRAPFVMP KAESAFSRSN AVYDTTIGWR FVNKLMKAQY GVDSMPETAE NVATDFNISR
QDQDQMALSS QLRAVAAQQA GHLAREIVGV SIPQKKGDAI LVDQDEHPRA TSMDVLAKLK
PIVRPDGTVT AGNASGVNDG ACALLLADEA SAARNGLTPR ARIVGMATAG VAPRVMGIGP
APATQKVLAL TGLTIAQMDV IELNEAFAAQ GLAVLRMLGV PDDDPRVNAW GGAIALGHPL
GASGARLATT AVNRLHQTGG RYALCTMCIG VGQGIAVILE RV
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