| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0866 |
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| Symbol | |
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| ID | 4687784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 920197 |
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| End bp | 920841 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833862 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_981104 |
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| Protein GI | 121603775 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.78885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAGCT ATCAAAAACG AAGCAAGCAG GAACTGGCCC GGCGCGTGGC GCAGGACATC
CACGACGGCG CCTACGTCAA CTTGGGCATC GGCATGCCGA CGCTGGTCGC CAACCACATC
CCGGCCGGGC GCGAGGTCAT CCTGCACAGT GAAAACGGCA TTCTCGGCAT GGGGCCGGCG
CCCGCTGCAG GAGCCGAAGA CTACGACCTC ATCAATGCCG GCAAGCAGCC CGTCACCCTG
CTTGCGGGCG GCGCCTACTT TCACCATGCC GACAGCTTTG CGATGATGCG CGGCGGCCAC
CTTGACATCT GCGTGCTGGG CGCGTTCCAG GTGTCAAGCA CGGGTGATCT GGCCAACTGG
AGCACCGGCG AGCCGGGCTC GATTCCGGCC GTGGGCGGCG CCATGGACCT GGCCATCGGC
GCCAAGCAGA CCTGGGTCAT GATGGACCTG CTGACCAAGC AAGGCGAGAG CAAGGTGGTG
GCGCAGTGCA GCTATCCGCT CACCGGCATT GCCTGCGTCA AGCGCATCTA CTCCGAACTG
GCGACGCTGG AATGCACGCC GGACGGCCTC AGGCTCATCG ACAAGGTTGA TGGGCTGGAG
CATGCCGCAC TCGAACAGCT GCTCGGCCTG CCGATTGCCG CCTGA
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| Protein sequence | MSSYQKRSKQ ELARRVAQDI HDGAYVNLGI GMPTLVANHI PAGREVILHS ENGILGMGPA
PAAGAEDYDL INAGKQPVTL LAGGAYFHHA DSFAMMRGGH LDICVLGAFQ VSSTGDLANW
STGEPGSIPA VGGAMDLAIG AKQTWVMMDL LTKQGESKVV AQCSYPLTGI ACVKRIYSEL
ATLECTPDGL RLIDKVDGLE HAALEQLLGL PIAA
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