| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0857 |
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| Symbol | |
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| ID | 4687980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 912022 |
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| End bp | 913977 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833853 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_981095 |
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| Protein GI | 121603766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGC CCTCCCGCCT TGCTTTCACC TGCGTTGCCT TGACGGCCCT GCTCCTGGGG
CCTGCAGCCA GCGCGCAAAC CGCCGCGCCA GTATCGCCCG CCAGCACGTC CATGTCTTCC
GGATCGACGC CGCCGTCCAG CGTCCAGCAA ACCGCGCCGC CACCGGCACC TCCCCCCGAA
AAAATCGAAC CCGTGGACAC GCCGCAAGGC GCTGTCGGCC CGACCAGCGC CGCGCCCGAG
GTCACCGCGT TTGACATTGC CGTTCGCGCC CCGGCAGAGG TGCAGGAACT GCTTGAAAAA
CACCTTGAAC TGCAACGCTA CCGTGCCGTC ACCGATCTGG ATGAAGCCGA ACTGGCGCGC
CTGATCGTGC TGGCCGAACG CAATGTGCGC AACCTGGTCG GCACGCTCGG CTACTTCAGC
CCCGACATCC GCATCACCCG CGAAGGCGGC GTCAACGAAC ACCCCGTCAT CGTGGTGGCC
GTTGATCCCG GACAAGCCAC GAATATCGGC CCGGTGGCCA TCACCTTTGC GGGCGACATT
GCCGTCTCGC CGGACGCCGA CGCGACGGCC CAGCGCACTG AAATAGAGCG CGACTGGCGC
TTGCCGACAG GGCTGCGCTT TACCCAGGAC GCCTGGAGCA GCGCCAAGAC CCAGGCCTTG
CGGCAACTGG TGGCCCGCCG CTACCCGGCC GGCAAGCTGG CCGGCAGCCT GGCCGACGTG
GATGCCCCAG GCCGCATCGC CAGCCTGAGG GTCGATCTGG ACTCGGGGCC GCTGTACCGG
CTCGGCCCGA TGCAGGTCAG CGGCGTGGAA CGCTACGACC CGGCGCTGGT GCCGCGACTG
GCGCGCCTGA ACCAGGGTGA TATTTACGAC CTGAACCAGC TGGTGCAGGC GCAGCAGCGG
CTGGCTGCCA GCGGTTATTT TGATTCGGCC TATGTCTTCA TCAACCCCGA GAACGACCCG
CTGGCTGTTC CCGTGCAGGT GCAGGTGCGT GAAGCCAAGC TGCAAAAGGT CGTTCTGGGC
GTGGGCATGA CCACCGACAG CGGGCCGCGT GCATCGGTGG AGCACACGCA TCACCGGGTG
CCGGGCATCG GCTGGCGCGC CGTCACCAAG CTGCAGCTGG AGAAAAAATC GCCCTTTGTC
CAGACCGAAT GGACCTCCAT CCCGGATGAA GCGAACTGGC GCTGGGGGGT GCTGGGCCGC
GTCGAGCGGA TCAATGACAA TGAATTGATC ACCCAGGCGC AGCGGCTGCG GTTTGGCCGG
TCGCAGGCCG GCGACCGGAT CGACCGCAAC ATTTATGTGC AATACGACCG CGCCAATGTT
CAGGGCGCGG GCCTGCTGGG CAATTCCGCA GCCGATACCG GCGACGGCTC GGCGCTGACG
GCCAATTACG TCTGGACCGG CCGCTACTTT GACAGCCTGC CGTTTCCCGC CAAGGGTTAT
GCCCTTGGCT TCGAGCTGGG TGCCGGCACC ACACTGGGCA AAGACCGCCA GCCGTTTACC
CGCACGGTGG GCCGCTGGAT GGGCATCAAG CCGCTGGAGC GCGGCCGCAT CGCCATGCGC
GCGGAAGCCG GCGCCGTGCT GGCCAGGGAC ACGGCCAACA TCCCGGCCAC CCAGCTGTTT
CGCACCGGCG GCGACAACAC GGTGCGCGGC TACGGCTACC GCGACATCGG CATCAAGCTG
GCCAACGGCG TGATCGGTCC CGGCCGCTAC CTGGCGGTCG GCAGCGTCGA GTGGCAGCGG
CCCATCACGC TCAAGGGTCG GCCCAGCGAG TTCGAGCACA CGGTATTCAT CGACGCCGGT
GCCGTGGCCG ACAAGCCGCA AGACCTGAGC CCTTCCTTCG GCATCGGCAC CGGCGTGCGC
TGGAGAAGCC CGATTGGACC GTTGCAGATT GACCTGGCCT ATGGCCTGAA GGTCAGGCAG
GCGCGCCTGC ACATCAGCGT GGGCTTTGTC TTCTGA
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| Protein sequence | MPAPSRLAFT CVALTALLLG PAASAQTAAP VSPASTSMSS GSTPPSSVQQ TAPPPAPPPE
KIEPVDTPQG AVGPTSAAPE VTAFDIAVRA PAEVQELLEK HLELQRYRAV TDLDEAELAR
LIVLAERNVR NLVGTLGYFS PDIRITREGG VNEHPVIVVA VDPGQATNIG PVAITFAGDI
AVSPDADATA QRTEIERDWR LPTGLRFTQD AWSSAKTQAL RQLVARRYPA GKLAGSLADV
DAPGRIASLR VDLDSGPLYR LGPMQVSGVE RYDPALVPRL ARLNQGDIYD LNQLVQAQQR
LAASGYFDSA YVFINPENDP LAVPVQVQVR EAKLQKVVLG VGMTTDSGPR ASVEHTHHRV
PGIGWRAVTK LQLEKKSPFV QTEWTSIPDE ANWRWGVLGR VERINDNELI TQAQRLRFGR
SQAGDRIDRN IYVQYDRANV QGAGLLGNSA ADTGDGSALT ANYVWTGRYF DSLPFPAKGY
ALGFELGAGT TLGKDRQPFT RTVGRWMGIK PLERGRIAMR AEAGAVLARD TANIPATQLF
RTGGDNTVRG YGYRDIGIKL ANGVIGPGRY LAVGSVEWQR PITLKGRPSE FEHTVFIDAG
AVADKPQDLS PSFGIGTGVR WRSPIGPLQI DLAYGLKVRQ ARLHISVGFV F
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