| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0834 |
|---|
| Symbol | |
|---|
| ID | 4686615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 882477 |
|---|
| End bp | 885452 |
|---|
| Gene Length | 2976 bp |
|---|
| Protein Length | 991 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639833829 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_981072 |
|---|
| Protein GI | 121603743 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCA CGAAAAAATC CTCCGGCCTT CCGGGTCAAG CAGCGCATCG CCCTGGCACC
GCGCGCTTTG TGCAAAGCCT GGCGCGCGGC CTGTCCAACG CACTTCCGAC CATGGACCGG
CGCGCCTTCC TGCGGCGCTC GGGCCTGGGG ATCGGCGTCG GCCTGGCGGC GACCCAGCTG
ACGCTGGTCA GGAAAGCCAG GGCAGCCGCG CCCGGCGAGG CCGGGGGCAA CTCGAAAATC
GAGGTCAAGC GCACCGTCTG CTCGCACTGC TCGGTCGGCT GCGCGGTCGA TGCGGTGGTT
GAAAACGGCG TTTGGGTGCG CCAGGAAGCG GTGTTTGATT CGCCCATCAA TCTGGGCGCG
CACTGCGCCA AGGGCGCGGC GCTGCGCGAA CACGGTCACG GCGAGTACCG GCTGCGCTAC
CCGATGAAAC TGGTGAACGG CAAATACGAG CGCATCAGCT GGGACACGGC CCTCAGTGAA
ATCACCGAGC GCATGCTGGC GCTGCGCAAG GAAAGCGGCC CGGACTCGGT GTATGTGATC
GGTTCGTCCA AGCACAACAA CGAGCAGGCT TACCTGCTGC GCAAGTGGAT GAGTTTTTGG
GGCAGCAACA ACTGCGACCA CCAGGCCCGC ATCTGCCACT CGACCACGGT CGCCGGCGTG
GCCAACACCT GGGGCTACGG CGCCATGACC AATTCGTACA ACGACATGCA AAACAGCAAG
TGCGCGCTGT ACATTGGTTC GAACGCCGCC GAGGCCCATC CGGTCAGCCT GCTGCACATG
CTGCACTCCA AGGAAAAGGG CTGCAAGATG ATCGTGGTCG ATCCGCGATT CACGCGAACC
GCCGCCAAGG CCGACGACTA CATCCGCATC CGCTCGGGCT CGGACATTCC CTTCCTGTTC
GGCGTGCTGC ACCACATCTT CAAGAACGGC TGGGAAGACA CCCAGTACAT CAATGACCGT
GTTTATGGCA TGGACAAGGT CAAGGAAGAG GTGCTGGCCA AATGGACGCC GGACAAGGTC
GAGGAAGCCT GCGGCGTGAA CGAAGCCACC GTGCTCAAGG TGGCCACGAT GATGAGCCAG
AACCGGCCCA GCACCATCGT CTGGTGCATG GGCCAGACCC AGCACACCAC CGGCAACGCC
ATCGTGCGCG CCTCCTGCAT CCTGCAACTG GCGCTGGGCA ACGTCGGCAA GTCCGGTGGT
GGCACCAACA TCTTCCGGGG CCATGACAAC GTGCAGGGCG CCACCGACGT CGGCCCCAAC
CCCGACTCGC TGCCGGGCTA CTACGGCCTG GCCGAAGGTT CGTGGAAGCA TTTCGCCAAG
GCCTGGGGCG TGGACTTTGA CTGGATCAAG GGCCGCTACG CATCGCCCGC GATGATGGGC
AAGCCCGGTA TCACGGTGTC GCGCTGGATC GACGGCGTGC TGGAGAAAAA CGAATTCATC
GACCAGGATT CCAACCTGCG CGGCGTTTTC TACTGGGGCC ATGCGCCCAA CTCCCAGACC
CGGGGCCTGG AGATGAAGCG GGCCATGGAC AAGCTCGACC TGCTGGTCGT GGTGGACCCG
TACCCGTCGG CCACCGCCGC CATGGCCGCG ATGCCGGGCA AGGCCGAAGA CCTCAATCCG
AACCGTGCGG TGTACCTGCT GCCGGCCGCC ACGCAGTTCG AGACCAGCGG CTCGGTCACG
GCGTCGAACC GCTCGCTGCA GTGGCGCGAA AAGGTCATCG AGCCGCTGTG GGAAAGCCGC
AGCGACCACA TGATCATGCA GCAGTTCGCC GACCGGCTGG GCTTTGGCAA GGAACTGTCC
AAGAACTTCA AGATGCAGCA GGTCAAGGGC ATGGACGAGC CCATGCCCGA AGAAATCCTG
CGCGAAATCA ACAAGACCTG CTGGACCATC GGCTACACCG GCCAGAGCCC GGAGCGCCTG
AAGGCGCACA TGCGCAACAT GCACCTGTTC GATGTCAAGA CGCTCAAGTC CAGGGGCGGC
AAGGACAAGG AAACCGGCTA TGACACGGCG GGCGATTATT TCGGCCTGCC ATGGCCGTGC
TATGGCACAC CTGAACTCAA GCATCCCGGT TCGCCCAACC TCTACGACAC CTCGAAACAC
GTCATGGAAG GCGGTGGCAA CTTCCGCGCC AACTTCGGCG TCGAGCGCGA GGGCAAAAAC
CTGCTCGCGG AAGATGGTTC ACATTCCGTA GGCGCCGACA TCACCACTGG CTACCCGGAG
TTTGACCACA TCCTGATGAA AAAGCTCGGC TGGTGGGATG AGCTGAGCGA GCCTGAAAAA
GCTGCCGCTG AAGGCAAGAA CTGGAAAACC GACTCGTCGG GCGGCATCAT CCGCGTGGTC
ATGAAAAACC ATGGCTGCCA TCCGTTCGGC AATGCCAAGG CGCGTGCCGT GGTGTGGAAT
TTCCCCGACG CGATTCCACA GCACCGCGAG CCGCTCTACG GCATCCGGCC CGACCTGGTC
GCCAAGTACC CGACGCATGA CGACAAGAAA GCCTTCTGGC GCCTGCCGAC GCTGTACAAG
ACCTTGCAGG ACAAGAACAT CGCCGACAAG GTGCATGAAA AATTTCCGCT GATCCTGACC
TCCGGGCGGC TGGTCGAGTA CGAAGGCGGC GGCGAGGAAA CCCGCTCCAA CCCGTGGCTG
GCCGAGTTGC AGCAGGAAAT GTTCATCGAG ATCAACCCCA AGGTGGCCGC CAACAAGGGC
ATCCGCAACG GCGAACGCGC CTGGGTCAGC ACGCCGACCG GCGCGCGCCT GAATGTGCAG
GCGCTGGTCA CCGAGCGCGT CGGGCCAGAT ACCGTGTTCA TGCCGTACCA CTTCTCGGGG
CGCTGGCAGG GCGCCGACAT GCTGGCTTAC TACCCGGCGG GCGCGCACCC GGTGGTGCGT
GGTGAAGCCG CCAATACCGG CACCACCTAC GGCTACGACA GCGTGACGAT GATGCAGGAA
ACCAAGACAA CCGTTTGCAA CGTGGAAAGG GCCTGA
|
|---|
| Protein sequence | MLLTKKSSGL PGQAAHRPGT ARFVQSLARG LSNALPTMDR RAFLRRSGLG IGVGLAATQL
TLVRKARAAA PGEAGGNSKI EVKRTVCSHC SVGCAVDAVV ENGVWVRQEA VFDSPINLGA
HCAKGAALRE HGHGEYRLRY PMKLVNGKYE RISWDTALSE ITERMLALRK ESGPDSVYVI
GSSKHNNEQA YLLRKWMSFW GSNNCDHQAR ICHSTTVAGV ANTWGYGAMT NSYNDMQNSK
CALYIGSNAA EAHPVSLLHM LHSKEKGCKM IVVDPRFTRT AAKADDYIRI RSGSDIPFLF
GVLHHIFKNG WEDTQYINDR VYGMDKVKEE VLAKWTPDKV EEACGVNEAT VLKVATMMSQ
NRPSTIVWCM GQTQHTTGNA IVRASCILQL ALGNVGKSGG GTNIFRGHDN VQGATDVGPN
PDSLPGYYGL AEGSWKHFAK AWGVDFDWIK GRYASPAMMG KPGITVSRWI DGVLEKNEFI
DQDSNLRGVF YWGHAPNSQT RGLEMKRAMD KLDLLVVVDP YPSATAAMAA MPGKAEDLNP
NRAVYLLPAA TQFETSGSVT ASNRSLQWRE KVIEPLWESR SDHMIMQQFA DRLGFGKELS
KNFKMQQVKG MDEPMPEEIL REINKTCWTI GYTGQSPERL KAHMRNMHLF DVKTLKSRGG
KDKETGYDTA GDYFGLPWPC YGTPELKHPG SPNLYDTSKH VMEGGGNFRA NFGVEREGKN
LLAEDGSHSV GADITTGYPE FDHILMKKLG WWDELSEPEK AAAEGKNWKT DSSGGIIRVV
MKNHGCHPFG NAKARAVVWN FPDAIPQHRE PLYGIRPDLV AKYPTHDDKK AFWRLPTLYK
TLQDKNIADK VHEKFPLILT SGRLVEYEGG GEETRSNPWL AELQQEMFIE INPKVAANKG
IRNGERAWVS TPTGARLNVQ ALVTERVGPD TVFMPYHFSG RWQGADMLAY YPAGAHPVVR
GEAANTGTTY GYDSVTMMQE TKTTVCNVER A
|
|---|
| |