| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0816 |
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| Symbol | |
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| ID | 4686413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 859225 |
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| End bp | 860415 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833813 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_981056 |
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| Protein GI | 121603727 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.847489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC ACGACGTTCA GCACTACATG CGCGGCGGCA CGCTGCAACT CGCGGCCCTG
CCGCCACTGT CGCTGTATGT GCACCTGCCC TGGTGCATCA AAAAATGCCC GTATTGCGAT
TTCAATTCGC ATGAAGCGCC GGGCGAGCTG CCCGAGCAGC GCTACATCGA TGCGCTGGTG
GCCGACCTGG AGGCGTCGCT GCCGCTGGTC TGGGGCCGCA CGGTGCACAG CATCTTCATT
GGCGGCGGTA CGCCCAGCCT GTTTTCGCCG CAAGCGATTG ACCGCCTGCT GGGCGACATC
CGCGCGCGGC TGCGGCTGGA GGCCGACTGC GAAATCACGC TCGAAGCCAA CCCCGGCACG
TTCGAGAAAG ACCGTTTCAG GGCTTTTTGC AGCGCCGGCG TGAACCGCCT GTCCATCGGC
GTGCAGAGTT TTGACGATGT TCACCTCAAG GCGCTGGGCC GGGTGCATGA CCGCGCCCAG
GCGATTGCGG CGGTCGAGGA GGCGGCGCAG GCCTTCGACA CCTTCAACCT TGATATCATG
TACGCGCTGC CCGGCCAGAC GCTCGAAAAC CAGGCGCAGG ACATGCGGCA GGCGCTGGCG
ATGCAGCCGC CGCACATCTC GATTTACCAC CTGACGATTG AGCCCAACAC CTACTTTGCC
AAGTTTCCGC CGCTGATCCC CGAGGAGGAC ACGGCCTACG CCATGCTCGA CCAGATCACC
GAGATGACCG AGGGCGCAGG CCTGCAGCGC TACGAAGTCT CTGCCTACGC CAGGCCCGGC
CATCGCTGCT TTCACAACCT CAACTACTGG CAGTTTGGCG ACTATCTGGG CATTGGCGCC
GGCGCGCACA GCAAGCTCAG CTTTGCCCAC CGGGTGGTGC GCCAGGTGCG CGCGCGCGAG
CCCCGGCTGT ACATGGACAA AGCGCTGGCC GGGAATGCGG TGGCGCAGGA AACGGAAGTC
AGCCGTGCCG ATCTGCCGTT TGAATTCATG CTCAATGCCC TGCGGCTGAA GGACGGGTTC
AAGCTGCAGG ATTTTGCCGA AAAGACGGGC CTGCCGTTCA CCGCGATTCA AAAAGGGCTG
GAAGAGGCTG AGCGCAAGGG CTTGATCGAG CGCGATTTTG TCCACGCCAA GCCGACCGAG
CGCGGCTTTG ATTTCTTGAA CGACCTGCAG TCGCTGTTTC TGGCTGACTG A
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| Protein sequence | MTQHDVQHYM RGGTLQLAAL PPLSLYVHLP WCIKKCPYCD FNSHEAPGEL PEQRYIDALV
ADLEASLPLV WGRTVHSIFI GGGTPSLFSP QAIDRLLGDI RARLRLEADC EITLEANPGT
FEKDRFRAFC SAGVNRLSIG VQSFDDVHLK ALGRVHDRAQ AIAAVEEAAQ AFDTFNLDIM
YALPGQTLEN QAQDMRQALA MQPPHISIYH LTIEPNTYFA KFPPLIPEED TAYAMLDQIT
EMTEGAGLQR YEVSAYARPG HRCFHNLNYW QFGDYLGIGA GAHSKLSFAH RVVRQVRARE
PRLYMDKALA GNAVAQETEV SRADLPFEFM LNALRLKDGF KLQDFAEKTG LPFTAIQKGL
EEAERKGLIE RDFVHAKPTE RGFDFLNDLQ SLFLAD
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