Gene Pnap_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0808 
Symbol 
ID4687469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp851709 
End bp852260 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content55% 
IMG OID639833805 
Producttranscription elongation factor GreB 
Protein accessionYP_981048 
Protein GI121603719 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.751815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CCTTCACCAA AGAAACCGAC CCTGACGACG AGGACGACAC GCCGGTCCCC 
AGCCAGTCTG TGAGCGGGAA AAATTACATC ACGCCTCAAG GCTACAACCG TCTGCGGGTG
GAATTGCTCG ATCTGATTGA CAGCGAACGG CCCAAAGTCG TGGATATCGT CCACTGGGCG
GCCAGCAACG GCGACCGGTC AGAAAATGGC GACTACCTCT ATGGAAAAAA ACGACTCCGC
GAGATTGACC GGCGCATCCG TTTTCTGACG AAAAGGCTGG AAATCGCTGA AATCAGCAAT
CCTTGCGTCC ACCATGGCAA TGACCAGGTG TTTTTTGGCG CCACGGTCAC CTATGGCGAT
GACGAGGGGC TTGAACGGAC CGTGACCATT TTGGGCGTTG ATGAAGCGAT CAGTGCAATG
GGGCAGATCA GCTGGATTTC GCCGGTGGCC AGCGCACTTC TCAAGGCAAG GGTAGGCGAT
GAAGTCACCC TTGTCACGCC CCAGGGAACG CAACTCCTTG AAGTACTGAA AGTTGACTAT
CCCAAGGGCT GA
 
Protein sequence
MNKAFTKETD PDDEDDTPVP SQSVSGKNYI TPQGYNRLRV ELLDLIDSER PKVVDIVHWA 
ASNGDRSENG DYLYGKKRLR EIDRRIRFLT KRLEIAEISN PCVHHGNDQV FFGATVTYGD
DEGLERTVTI LGVDEAISAM GQISWISPVA SALLKARVGD EVTLVTPQGT QLLEVLKVDY
PKG