Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0808 |
Symbol | |
ID | 4687469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 851709 |
End bp | 852260 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639833805 |
Product | transcription elongation factor GreB |
Protein accession | YP_981048 |
Protein GI | 121603719 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.751815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CCTTCACCAA AGAAACCGAC CCTGACGACG AGGACGACAC GCCGGTCCCC AGCCAGTCTG TGAGCGGGAA AAATTACATC ACGCCTCAAG GCTACAACCG TCTGCGGGTG GAATTGCTCG ATCTGATTGA CAGCGAACGG CCCAAAGTCG TGGATATCGT CCACTGGGCG GCCAGCAACG GCGACCGGTC AGAAAATGGC GACTACCTCT ATGGAAAAAA ACGACTCCGC GAGATTGACC GGCGCATCCG TTTTCTGACG AAAAGGCTGG AAATCGCTGA AATCAGCAAT CCTTGCGTCC ACCATGGCAA TGACCAGGTG TTTTTTGGCG CCACGGTCAC CTATGGCGAT GACGAGGGGC TTGAACGGAC CGTGACCATT TTGGGCGTTG ATGAAGCGAT CAGTGCAATG GGGCAGATCA GCTGGATTTC GCCGGTGGCC AGCGCACTTC TCAAGGCAAG GGTAGGCGAT GAAGTCACCC TTGTCACGCC CCAGGGAACG CAACTCCTTG AAGTACTGAA AGTTGACTAT CCCAAGGGCT GA
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Protein sequence | MNKAFTKETD PDDEDDTPVP SQSVSGKNYI TPQGYNRLRV ELLDLIDSER PKVVDIVHWA ASNGDRSENG DYLYGKKRLR EIDRRIRFLT KRLEIAEISN PCVHHGNDQV FFGATVTYGD DEGLERTVTI LGVDEAISAM GQISWISPVA SALLKARVGD EVTLVTPQGT QLLEVLKVDY PKG
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