Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0803 |
Symbol | |
ID | 4688879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 846101 |
End bp | 846859 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639833800 |
Product | ABC transporter related |
Protein accession | YP_981043 |
Protein GI | 121603714 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATC CTCACCTTCG CATCCACGAC CTGCGTGCCG GCTACGGCCG GGCCGAGGTG CTGCACGGAC TGGACCTGCA GGCCGCCAAG GGCAGCGTCA TCACCGTCAT TGGCCCCAAC GGGGCCGGCA AGTCCACCCT GCTCAACACG CTGATGGGCA TACTGCCCGG CCGCGGCGCC ATCGAGTTCG AGGGCCAGTC CATCGCCGCG CTGACGCTGG AAGACCGCGT CATGCTCGGC ATCGCGCTGG TGCCCGAAAA GCGTGAACTG TTCGGCACCA TGCCGGTGGA AGACAACCTG GTGCTGGGCG GCTTTCGCCA GATGCGGCTG GGCAATGCCC AGTGGCGTGA CCGCCTGGCC GACGTCTATG ACTTGTTTCC GCGCCTGAAA GAGCGGCGCA TGCAGCTGGC CGGCACGCTG TCCGGCGGCG AGCGGCAGAT GCTGGCGGTC GGCCGCTCGC TGATGTCGCG CCCCAGCCTC TTGATGCTTG ATGAGCCCAG CCTGGGCCTG GCGCCACTGG TGGTGCGCGA GATTTTTTCC ATCATCACCG AGTTGCGCAA GACCGGCGTC ACCATCGTTC TGGTCGAGCA GAACGCACGC GCCGCGCTGG CCGTGGCCGA TTACGGCTAT GTGCTGGAAA TGGGCGAGCT AAGCCTGCAT GGCCCGGCCG CCGAGCTGGC CGAAGATCCG CGCGTGATCG ACACCTACCT GGGCGCTGCC CGCAAGAAAG AGGAGGACAT CAAGATGCCG TCCGCATGA
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Protein sequence | MTNPHLRIHD LRAGYGRAEV LHGLDLQAAK GSVITVIGPN GAGKSTLLNT LMGILPGRGA IEFEGQSIAA LTLEDRVMLG IALVPEKREL FGTMPVEDNL VLGGFRQMRL GNAQWRDRLA DVYDLFPRLK ERRMQLAGTL SGGERQMLAV GRSLMSRPSL LMLDEPSLGL APLVVREIFS IITELRKTGV TIVLVEQNAR AALAVADYGY VLEMGELSLH GPAAELAEDP RVIDTYLGAA RKKEEDIKMP SA
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