Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0802 |
Symbol | |
ID | 4690037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 844323 |
End bp | 846089 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639833799 |
Product | ABC transporter related |
Protein accession | YP_981042 |
Protein GI | 121603713 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAA GACGTTATGG ACTCTGGGCG CTCATCGTGG TGCTTGTTGG CGTGGCCGTG CTGCCGCTGC CCGATTTCTG GATCACCCAG CTCAACTACA TTGGCCTGTA CAGCCTGGTC TGCCTGGGGC TGGTTCTGCT GACCGGCGTG GCCGGGCTGA CCTCCTTCGG CCAGGCCGCA TTTGTCGGCA TCGGCGCTTA CTCGACCGCC TGGCTGACGC TCAACACCGG CCTGTCGCCG TGGCTCACGC TGTTCATCGG CCTGGGGCTG ACGGCGGCCT GCGCGCTGAT CCTGGCTTTG CTCACGCTCA GGATGTCGGG ACACTACCTG CCGCTGGCCA CCATGGCCTG GGGCCTGTCG CTCTACTACC TGATGGGCAA CCTTGACGCG CTGGGCAAAT ACGATGGCCT GCTGGGCATC CAGGGCCTCA CGCTGCTGGG CTGGGAAGTC GGCCAGGGGC GCGGCTTTTT TGCGCTGACC TGGACCATCG TCGTGCTGGC GGCGCTGGCC ATCGTGCAGC TGCTCGACTC CCGGGCAGGG CGGGCGATGC GGTCGCTGCG CAGCGGCACG CTGATGGCCG AGGCCATGGG CGTGTCCACG CTGCGCTACA AGATCATCAT TTTCCTGATT GCCGCACTGC TGGCGTCCCT CTCGGGCTGG CTCTTTGCGC ACTTTCAGCG CACCGTCAAC CCCTCGCCCT TCGGGCTGAA GATGGGCATC GAGTACCTGT TCATGACGGT GGTCGGCGGC GTCGGCCATG TCTGGGGCGC GCTCACCGGC GCGCTGCTCA CCAAGCTGCT CGAAGACCAG CTCCAGGTGC TGCTGCCCCA GTGGCTGGGC ACCAGCGGCA GCTATGAAAT CATTGTGTTC GGCATCGTGC TGGTGCTGAT GCTCAAGTTC CTGCCCGATG GCCTGTGGTC CTTCGTGGAT CGGCGCGTGC CCCGCGCCAG GCGCAAGGAA GACTGGGCCG GCGCCCCCGA TCTGCCCGCG CGCGCCAAGC CGGAGCAGGG CGAACTGGTG CTCGACGTGC AGGCCATCCG CAAGGAGTTT GGCGGGCTGG TCGCGGTCAA GGACATCAGT TTCCAGATCC GCGCTGGCCA GATCGTCGGC CTGATTGGAC CGAACGGTGC CGGCAAATCG ACCACCTTCA ACCTGATCTC TGGCGTGCTG TCTCTCACCA GCGGCAATGT GGTGTTTCGC GGCGAGAAAA TCGGCGGCCT GCGTTCACGG GAGATTGCGG CACGCGGCAT GTCGCGCACC TTTCAGCACG TCAAGATGAT TCCCGACATG ACCGTGCTGG AAAACGTCGC CCTGGGCACC CACCTGCGCG GCACCAAGGG CGTGGTGTCG GCCATGACCC GGCTCAACCG CAGCGAAGAA CAGCAGTTGT TCCGCGAAGC CCAGCGCCAG CTTGAGCGCA TTGGCATGGG TGCTTTTCTG CATGAGCAGG CCGGCAACCT GGCGATGGGG CCGCAGCGCC TGATGGAAAT TGCCCGCGCC CTGTGCAGCG ATCCGGCCCT GCTGCTGCTC GACGAGCCGG CCGCCGGCCT GCGCCACCAG GAAAAGCTGG CCCTGGGCGG TGTGCTGCGC CAGCTGCGCG CCGAAGGCAT GAGCATCTTG CTGGTCGAGC ATGACATGGA CCTGGTCATG GGCATCTGCG ACCACCTGGT CGTGATGGAG TTCGGCACCT ACCTGACCGA AGGCACGCCG GCCTTCATTC AGCAAAGCCC CGCCGTGCGC GCCGCCTACC TCGGCACGGA ACATTAA
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Protein sequence | MLARRYGLWA LIVVLVGVAV LPLPDFWITQ LNYIGLYSLV CLGLVLLTGV AGLTSFGQAA FVGIGAYSTA WLTLNTGLSP WLTLFIGLGL TAACALILAL LTLRMSGHYL PLATMAWGLS LYYLMGNLDA LGKYDGLLGI QGLTLLGWEV GQGRGFFALT WTIVVLAALA IVQLLDSRAG RAMRSLRSGT LMAEAMGVST LRYKIIIFLI AALLASLSGW LFAHFQRTVN PSPFGLKMGI EYLFMTVVGG VGHVWGALTG ALLTKLLEDQ LQVLLPQWLG TSGSYEIIVF GIVLVLMLKF LPDGLWSFVD RRVPRARRKE DWAGAPDLPA RAKPEQGELV LDVQAIRKEF GGLVAVKDIS FQIRAGQIVG LIGPNGAGKS TTFNLISGVL SLTSGNVVFR GEKIGGLRSR EIAARGMSRT FQHVKMIPDM TVLENVALGT HLRGTKGVVS AMTRLNRSEE QQLFREAQRQ LERIGMGAFL HEQAGNLAMG PQRLMEIARA LCSDPALLLL DEPAAGLRHQ EKLALGGVLR QLRAEGMSIL LVEHDMDLVM GICDHLVVME FGTYLTEGTP AFIQQSPAVR AAYLGTEH
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