| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0787 |
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| Symbol | aspS |
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| ID | 4687956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 829561 |
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| End bp | 831378 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833783 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_981027 |
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| Protein GI | 121603698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.574625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.685476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG CTGATACACA AGTCGCTCAA ATGCGTTCCA ACTATTGCGG TCTGGTGACC
GAGAGCCTGA TGGGCCAGAC GGTCAGCCTG TGCGGCTGGG TCAACCGCCG GCGCGACCAT
GGCGGCGTGA TCTTCATCGA CCTGCGCGAC CGCGAAGGTT ATGTGCAGGT GGTGTGCGAC
CCGGACCGGG CCGAGATGTT CGGCATCGCC GAAGACGTGC GCAACGAGTT CTGCGTTCAG
GTCAAGGGCA TTGTGCGCGC CCGTCCTGAA GGCACGGCCA ACGCCAGCCT GAAAAGCGGC
CAGGTCGAGG TGCTGTGCCA TGAGCTGATC GTGCTGAATG CCAGCGTCAC GCCACCGTTT
CAGCTCGACG ACGACAACCT GTCGGAAACC ACGCGCCTGA CGCACCGGGT GCTGGACCTG
CGCCGCCCCT ACATGCAGAA CAACCTGATG CTGCGCTACC GCGTGGCGAT GGAAACGCGC
AAGTTCCTCG ATGCCAACGG TTTCATCGAC ATCGAAACCC CCATGCTGAC CAAGAGCACG
CCCGAAGGCG CGCGTGATTA CCTGGTGCCC AGCCGTGTCA ACGAAGGCCA GTTTTTCGCC
CTGCCGCAAA GCCCGCAGCT GTTCAAGCAG TTGCTGATGG TGGCCGGTTT TGACCGCTAC
TACCAGATCA CCAAGTGCTT TCGCGACGAA GACCTGCGCG CCGACCGCCA GCCCGAATTC
ACGCAGATCG ATATTGAAAC ATCCTTCATG GGCGAGCAGG AAATCCGCGA CATGTTCCAG
GGCATGATCA GCAACATGTT CAAGACGGTG CTGAACACCG ACCTGGGCGA ATTTCCGGTC
ATGGCCTATG CCGATGCGAT GCACCGCTAC GGCTCGGACA AGCCCGATTT GCGCGTCAAC
CTCGAATTCA CTGAACTGAC CGATGTGATG GCCGATGTGG ACTTCAAGGT CTTCAGCGCG
CCGGCGACTA CTCCCGGTGG CCGCGTGGTG GCCCTGCGCG TGCCCGGCGG CGCTGAAATC
AGCCGCAGCG AAATTGATGC CTACACCGAA TTCGTCAAGA TTTACGGCGC CAAGGGCCTG
GCCTGGATCA AGGTCAACGA CGTTAGCAAG GGCCGTGAAG GCTTGCAAAG CCCCATCGTC
AAGAACATTC ACGATGCGGC GGTGGCTGAA ATCCTCAAGC GCACCGGTGC GCAAAACGGC
GACATCCTTT TCTTTGGCGC CGACAAGTCC AAGGTGGTCA ACGACAGCAT CGGGGCCTTG
CGCTTGAAGG TCGGCCACAG CGTCTTCGGC AAAAAGTCCG GTTTGTTCAC CAAGGGCTGG
AAGCCGCTGT GGGTGGTTGA TTTCCCGATG TTCGAATATG ACGAAGACGG CAAGCGCTGG
AGCGCGGTGC ATCACCCCTT CACAGCCCCG AAAGACGGCC ATGAAGACTG GATGGACACC
GACCCGGGGC GCTGCATCGC CAAGGCCTAT GACATGGTGC TCAACGGCTG GGAACTGGGC
GGCGGCTCGG TGCGTATCCA TCGCGCCGAC GTGCAAAGCA AGGTGTTCAG TGCGCTGAAC
ATTGGCCCGG AAGAGGCCCA GCTGAAGTTC GGCTTCCTGC TCGATGCGCT GCAGTATGGC
GCGCCGCCGC ACGGTGGTCT GGCCTTTGGC CTGGACCGCA TCGTGACCAT GATGACCGGC
GCCGAGTCGA TCCGCGACGT GATTGCCTTC CCCAAGACCC AGCGCGCGCA ATGCCTGCTG
ACCCATGCGC CGAGTCCGGT GGATGAGAAA CAGTTGCGCG AGTTGCATAT CCGCCTGCGC
AATCCGCTTC CGATCTGA
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| Protein sequence | MAIADTQVAQ MRSNYCGLVT ESLMGQTVSL CGWVNRRRDH GGVIFIDLRD REGYVQVVCD
PDRAEMFGIA EDVRNEFCVQ VKGIVRARPE GTANASLKSG QVEVLCHELI VLNASVTPPF
QLDDDNLSET TRLTHRVLDL RRPYMQNNLM LRYRVAMETR KFLDANGFID IETPMLTKST
PEGARDYLVP SRVNEGQFFA LPQSPQLFKQ LLMVAGFDRY YQITKCFRDE DLRADRQPEF
TQIDIETSFM GEQEIRDMFQ GMISNMFKTV LNTDLGEFPV MAYADAMHRY GSDKPDLRVN
LEFTELTDVM ADVDFKVFSA PATTPGGRVV ALRVPGGAEI SRSEIDAYTE FVKIYGAKGL
AWIKVNDVSK GREGLQSPIV KNIHDAAVAE ILKRTGAQNG DILFFGADKS KVVNDSIGAL
RLKVGHSVFG KKSGLFTKGW KPLWVVDFPM FEYDEDGKRW SAVHHPFTAP KDGHEDWMDT
DPGRCIAKAY DMVLNGWELG GGSVRIHRAD VQSKVFSALN IGPEEAQLKF GFLLDALQYG
APPHGGLAFG LDRIVTMMTG AESIRDVIAF PKTQRAQCLL THAPSPVDEK QLRELHIRLR
NPLPI
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