| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0774 |
|---|
| Symbol | |
|---|
| ID | 4689086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 815423 |
|---|
| End bp | 816274 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639833770 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_981014 |
|---|
| Protein GI | 121603685 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0850729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCCCA TCACTTGCGC GCAAGCCCTG GCGGCAGCCC GGCATGCCGG CCTGGACCGG
CTCGATGCCC AACTGCTGCT GCTGCACGCG CTGGGCAAAC CCGCCAGCGC CCGGTCCTGG
CTGCTGGCGC ACGACACCGA CGCGCTGGCG CAGGAGGTTG CCGAGGCGTT CCGCGCCCTG
AGCCTGCGCC GGGCCAGCGG CGAGCCGCTG GCGTACATCG TCGGCGGCAA GGAGTTTTTC
GGCCTGGCGC TGCAGGTGGA TGCGCGCGTG CTGGTGCCCC GGCCCGATAC CGAAACCCTG
GTGGAATGGT CGCTGGCCGT GCTGAAAGCT CCGGGCTTGA TGCCGCCATT GAAGGTTCTG
GACTTGGGCA CCGGCAGCGG CGCGATTGCC CTGGCCATTG CGCACAGCCT GAAGGCGACG
GGCCGCGAAG CGCAGGTCAC GGCGGTCGAT GCGAGCGCTG ATGCGCTGGA TGTCGCCCGT
GAAAACGCCC GGCGGCTGGG CCTGGCCGTG GCGTTCATTG AAAGCTCCTG GCTGCAAGGG
GTGAACGGAC GCTTTCACCT GATCGCCAGC AACCCGCCCT ACATTGCCAG CGCCGACCCG
CATCTGGCGG CGCTGGCCCA TGAACCGCTG CAGGCGCTGA CCGCCGGCAT GGACGGGCTG
GACGACATCC GGGACATCAT TCAACAGGCA CCAGATCACC TGCTGCCCGG CGGCTGGCTG
CTGCTGGAGC ATGGCTACGA CCAGGCTGGA AGGGTCCGGG AATTGCTGGT ACAGCGCGGT
TTTCTTCAGG TTCAGGGCCG TCAGGATCTG GCGGGCATCG AGCGCTGCTC GGGCGGGCAA
TGGCCGCCAT GA
|
|---|
| Protein sequence | MNPITCAQAL AAARHAGLDR LDAQLLLLHA LGKPASARSW LLAHDTDALA QEVAEAFRAL
SLRRASGEPL AYIVGGKEFF GLALQVDARV LVPRPDTETL VEWSLAVLKA PGLMPPLKVL
DLGTGSGAIA LAIAHSLKAT GREAQVTAVD ASADALDVAR ENARRLGLAV AFIESSWLQG
VNGRFHLIAS NPPYIASADP HLAALAHEPL QALTAGMDGL DDIRDIIQQA PDHLLPGGWL
LLEHGYDQAG RVRELLVQRG FLQVQGRQDL AGIERCSGGQ WPP
|
|---|
| |