Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0768 |
Symbol | |
ID | 4686420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 812031 |
End bp | 812882 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639833764 |
Product | prepilin peptidase |
Protein accession | YP_981008 |
Protein GI | 121603679 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.312939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.130991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCGG ATCTGGAGCC GGGACTTGTC GCCGTGCTCG CCGGGATTTT GGGCCTGCTG ATCGGCAGTT TCCTGAACGT CGTCATCTAC CGTGTTCCCA AAATAATGGA GCGCCAGTGG GCGCAGGAAT GTGCTGAACT GACGGGTGCA CCAGCGGAGC CGGCTGAAAA ATTCAACCTG CTGATACCAC GTTCGCGGTG TTCCAGTTGC GGCCACCTGA TTCGCTGGTA TGAAAACATT CCGGTGTTCA GCTACCTTTT CCTGCGGGGA AAGTGTTCGG CATGCGGCGC GCCCTATGGG GTTCGTTATC CGCTGGTTGA AGCGGTCACG GGCAGCCTGT TTTTCTTTTG CGCCTGGCGC TGGGGCTGGA CGCCGACGAC GCTGGTCTGG TGCGGATTTT CCGCGGTGCT GCTGGCGCTG GCGATGATTG ACTGGGACAC TACCCTGCTG CCGGACGACA TGACCTTGCC CCTGCTGTGG ACGGGGCTGA TTGCGGCGGC ATTGCAGTGG AACCCGGCGG TCAGCTTGTC CGCAGCTTTA TGGGGCGCGG TGGCCGGTTA TCTTTCGCTG TGGCTGGTTT ACTGGGCTTT CAAGCTGGCA ACCGGCAAGG AAGGCATGGG CTACGGCGAT TTCAAGCTCT TTGCCGCGCT GGGCGCCTGG TTTGGCTGGC CTGCGCTGGT GCCCATGATC CTGATGGCTT CGGTGATCGG CGCCATCATC GGTATCGCGA TGAAGTTTTC CAGCGGCCTG CGCGAAGGCG GCTATGTGCC GTTTGGCCCC TTTTTGGCCG GGGCAGGTTT TACCGCCATG ATTTTCGGTC CGCAGTCGAT CCTTCAATTT GTCGGGTTAT AA
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Protein sequence | MAPDLEPGLV AVLAGILGLL IGSFLNVVIY RVPKIMERQW AQECAELTGA PAEPAEKFNL LIPRSRCSSC GHLIRWYENI PVFSYLFLRG KCSACGAPYG VRYPLVEAVT GSLFFFCAWR WGWTPTTLVW CGFSAVLLAL AMIDWDTTLL PDDMTLPLLW TGLIAAALQW NPAVSLSAAL WGAVAGYLSL WLVYWAFKLA TGKEGMGYGD FKLFAALGAW FGWPALVPMI LMASVIGAII GIAMKFSSGL REGGYVPFGP FLAGAGFTAM IFGPQSILQF VGL
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