Gene Pnap_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0768 
Symbol 
ID4686420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp812031 
End bp812882 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID639833764 
Productprepilin peptidase 
Protein accessionYP_981008 
Protein GI121603679 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.312939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGG ATCTGGAGCC GGGACTTGTC GCCGTGCTCG CCGGGATTTT GGGCCTGCTG 
ATCGGCAGTT TCCTGAACGT CGTCATCTAC CGTGTTCCCA AAATAATGGA GCGCCAGTGG
GCGCAGGAAT GTGCTGAACT GACGGGTGCA CCAGCGGAGC CGGCTGAAAA ATTCAACCTG
CTGATACCAC GTTCGCGGTG TTCCAGTTGC GGCCACCTGA TTCGCTGGTA TGAAAACATT
CCGGTGTTCA GCTACCTTTT CCTGCGGGGA AAGTGTTCGG CATGCGGCGC GCCCTATGGG
GTTCGTTATC CGCTGGTTGA AGCGGTCACG GGCAGCCTGT TTTTCTTTTG CGCCTGGCGC
TGGGGCTGGA CGCCGACGAC GCTGGTCTGG TGCGGATTTT CCGCGGTGCT GCTGGCGCTG
GCGATGATTG ACTGGGACAC TACCCTGCTG CCGGACGACA TGACCTTGCC CCTGCTGTGG
ACGGGGCTGA TTGCGGCGGC ATTGCAGTGG AACCCGGCGG TCAGCTTGTC CGCAGCTTTA
TGGGGCGCGG TGGCCGGTTA TCTTTCGCTG TGGCTGGTTT ACTGGGCTTT CAAGCTGGCA
ACCGGCAAGG AAGGCATGGG CTACGGCGAT TTCAAGCTCT TTGCCGCGCT GGGCGCCTGG
TTTGGCTGGC CTGCGCTGGT GCCCATGATC CTGATGGCTT CGGTGATCGG CGCCATCATC
GGTATCGCGA TGAAGTTTTC CAGCGGCCTG CGCGAAGGCG GCTATGTGCC GTTTGGCCCC
TTTTTGGCCG GGGCAGGTTT TACCGCCATG ATTTTCGGTC CGCAGTCGAT CCTTCAATTT
GTCGGGTTAT AA
 
Protein sequence
MAPDLEPGLV AVLAGILGLL IGSFLNVVIY RVPKIMERQW AQECAELTGA PAEPAEKFNL 
LIPRSRCSSC GHLIRWYENI PVFSYLFLRG KCSACGAPYG VRYPLVEAVT GSLFFFCAWR
WGWTPTTLVW CGFSAVLLAL AMIDWDTTLL PDDMTLPLLW TGLIAAALQW NPAVSLSAAL
WGAVAGYLSL WLVYWAFKLA TGKEGMGYGD FKLFAALGAW FGWPALVPMI LMASVIGAII
GIAMKFSSGL REGGYVPFGP FLAGAGFTAM IFGPQSILQF VGL