| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0757 |
|---|
| Symbol | |
|---|
| ID | 4686851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 802610 |
|---|
| End bp | 803413 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833753 |
|---|
| Product | putative general secretory pathway N transmembrane protein |
|---|
| Protein accession | YP_980997 |
|---|
| Protein GI | 121603668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.142264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACA CCCCTTCCGT GGCCCCAGGC TCTGCCTTTG CCCCCTGGCG CTGGGCGATG
GCGGGCGCCC TTGCCGGATT GATACTGGCA CTGGTCTTGT TCGCCCCGGC CCGCTGGCTG
GCCGCGCTGG TCCGTCAGGC CAGCGGCGAA CATGTGCTAC TGGATGGCCC CCGTGGCGGT
TTTTGGCAAG GCTCGGCGCA ACTTGTCCTG TCGGGCGGCG CTGGCAGCCG TGAGGCCGTG
GCGCTACCCG GCCAGCTGAC CTGGACCATC CGTCCGGCCT GGAACGGCCT GAATGTTCAA
CTGAACGCCG AATGCTGCAT GCAGCAGGCG CTGCAGCTTC AGGCCAGGCT CGCAGGCTGG
AGCGGCGTGC AACTGACGCT GTCCGACAGC CAGTCGCAAT GGCCCGCCGG GCTGCTGGCC
GGCCTGGGAA CCCCCTGGAA CACCGTGCAG GCGCAAGGCC AACTGGTCGC TTCAACCCAG
GGTTTCAATG CCCGCTGGGC TCAGGGCCGG CTCATCCTGG CCGGCCGCCT GCAACTCGAC
GCCACACGGA TCTCGTCCCG CCTGTCCACC CTGCAGCCCA TGGGCAGCTA CCGCCTGCTG
CTCCAGGGCG GCAATCCTTC GACGCTGGAG CTGAACACCC TTGAAGGCAA GCTGCAACTC
ACCGGCCGGG GCCAGTGGGT CGGCCAGCGT TTGCGATTCG ATGGCGCTGC CAGCGCCACG
CCCGAGAGCA TCGATGCGCT TTCGAATCTC CTGAACATCA TTGGGCGGCG CAACGGCGCA
ACCGCCATCA TCAAAGTAGG TTAA
|
|---|
| Protein sequence | MAYTPSVAPG SAFAPWRWAM AGALAGLILA LVLFAPARWL AALVRQASGE HVLLDGPRGG
FWQGSAQLVL SGGAGSREAV ALPGQLTWTI RPAWNGLNVQ LNAECCMQQA LQLQARLAGW
SGVQLTLSDS QSQWPAGLLA GLGTPWNTVQ AQGQLVASTQ GFNARWAQGR LILAGRLQLD
ATRISSRLST LQPMGSYRLL LQGGNPSTLE LNTLEGKLQL TGRGQWVGQR LRFDGAASAT
PESIDALSNL LNIIGRRNGA TAIIKVG
|
|---|
| |