Gene Pnap_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0755 
Symbol 
ID4689504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp798974 
End bp800383 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content67% 
IMG OID639833751 
Productgeneral secretory pathway protein E 
Protein accessionYP_980995 
Protein GI121603666 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.179891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATC CCGCCCACTA CCCCCTGCCC TATGCGTTTG CCCGCAGCCA GCAGTTGCTG 
CTTGAGGACT TTGGCGGCGA CCTGACGCTG TGGCTGCACA GCCTGGGCAC ACCCGAAACG
GCGGGCGCCG TGAGCGAGGT GATGCGCAAG TTCGATGTGC AGCACATCAA CGTCGAGGCG
CCCGAGTTGC TCCAGCAGCG CATCAGCGCC GCCTATTCCC AGAGCGAATC CAGCGCCGCC
ACCGTCATCA GCGAGGTTGA AAGCGACGTC GATCTGTCGC GCATGATGCA GGCGCTGCCC
GCCATCGAGG ACTTGCTCGA AACGTCCGAC GACGCGCCCA TCATCCGCAT GCTCAACGCG
CTGCTGACGC AGGCCGTGCG CGACGGCGCC AGTGACATCC ACATCGAGCC CTACGAGCGC
CATTCCAGCG TGCGCTTCCG GGTCGATGGC TCGCTGCGCA ACGTGGTGCA ACCCAACCGG
GCGCTGCATG CCGCATTGAT CTCGCGCCTC AAAATCATGG CCGAACTCGA CATTGCCGAA
AAACGCCTGC CGCAGGACGG CCGCATCTCG CTGCGCATCG GCACGCGGGC GGTCGATGTG
CGCGTCAGCA CGCTGCCCAG CGCCCACGGC GAGCGCGCTG TGCTGCGGCT GCTCGACAAG
AGCGGCGACC GGCTCAACCT GGAAGCCGTC GGCATGCAGG GCGATGTGCT GTCGCGCTTC
GAGCACCTGG TGGCCCAGCC GCACGGCATC ATCCTGGTGA CCGGCCCGAC CGGCTCGGGC
AAGACCACCA CGCTGTATGC GGCGATGGAG CGGCTCGATA CCCGGCGCCA GAACATCATG
ACGGTGGAAG ACCCGATCGA GTACGAACTG GCCGGCGTCG GCCAGACGCA GGTCAACGCC
AAGATCGACC TGGACTTCGC CAAGGCCCTG CGCGCCATCC TGCGCCAGGA TCCGGACGTG
ATCATGATCG GCGAGATCCG CGACTTCGAA ACCGCGCAAA TCGCCATTCA GGCTTCGCTC
ACAGGCCACC TGGTGCTGGC CACGCTGCAC ACCAACGACG CCGCCAGCGC CGTGACCCGG
CTGACCGACA TGGGCATCGA GCCCTTCCTG CTCAGTTCGT CGCTGCTCGG CGTGCTGGCG
CAGCGGCTGG TGCGCAAGGT CTGCGTGCAT TGCAAAGGCG CCGGCTGCCC GAGCTGCGGC
CAGACCGGCT ACCAGGGCCG CACCGGCGTG TTCGAACTGC TGGCAACCGA CGACGCCATC
CGGGCGCAGA TCCATCACCA GGCCGCCGAA GCCGACCTGC GCGAAGCAGC GCTGAAGAAC
GGCATGACGC TGATGCGCGA CGACGGCGAG CGGCTGGTGC AAGCCGGCAT CACCACGCGC
GAGGAACTGG TGCGGGTGAC CCGCGACTGA
 
Protein sequence
MEHPAHYPLP YAFARSQQLL LEDFGGDLTL WLHSLGTPET AGAVSEVMRK FDVQHINVEA 
PELLQQRISA AYSQSESSAA TVISEVESDV DLSRMMQALP AIEDLLETSD DAPIIRMLNA
LLTQAVRDGA SDIHIEPYER HSSVRFRVDG SLRNVVQPNR ALHAALISRL KIMAELDIAE
KRLPQDGRIS LRIGTRAVDV RVSTLPSAHG ERAVLRLLDK SGDRLNLEAV GMQGDVLSRF
EHLVAQPHGI ILVTGPTGSG KTTTLYAAME RLDTRRQNIM TVEDPIEYEL AGVGQTQVNA
KIDLDFAKAL RAILRQDPDV IMIGEIRDFE TAQIAIQASL TGHLVLATLH TNDAASAVTR
LTDMGIEPFL LSSSLLGVLA QRLVRKVCVH CKGAGCPSCG QTGYQGRTGV FELLATDDAI
RAQIHHQAAE ADLREAALKN GMTLMRDDGE RLVQAGITTR EELVRVTRD