Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0755 |
Symbol | |
ID | 4689504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 798974 |
End bp | 800383 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833751 |
Product | general secretory pathway protein E |
Protein accession | YP_980995 |
Protein GI | 121603666 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.179891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCATC CCGCCCACTA CCCCCTGCCC TATGCGTTTG CCCGCAGCCA GCAGTTGCTG CTTGAGGACT TTGGCGGCGA CCTGACGCTG TGGCTGCACA GCCTGGGCAC ACCCGAAACG GCGGGCGCCG TGAGCGAGGT GATGCGCAAG TTCGATGTGC AGCACATCAA CGTCGAGGCG CCCGAGTTGC TCCAGCAGCG CATCAGCGCC GCCTATTCCC AGAGCGAATC CAGCGCCGCC ACCGTCATCA GCGAGGTTGA AAGCGACGTC GATCTGTCGC GCATGATGCA GGCGCTGCCC GCCATCGAGG ACTTGCTCGA AACGTCCGAC GACGCGCCCA TCATCCGCAT GCTCAACGCG CTGCTGACGC AGGCCGTGCG CGACGGCGCC AGTGACATCC ACATCGAGCC CTACGAGCGC CATTCCAGCG TGCGCTTCCG GGTCGATGGC TCGCTGCGCA ACGTGGTGCA ACCCAACCGG GCGCTGCATG CCGCATTGAT CTCGCGCCTC AAAATCATGG CCGAACTCGA CATTGCCGAA AAACGCCTGC CGCAGGACGG CCGCATCTCG CTGCGCATCG GCACGCGGGC GGTCGATGTG CGCGTCAGCA CGCTGCCCAG CGCCCACGGC GAGCGCGCTG TGCTGCGGCT GCTCGACAAG AGCGGCGACC GGCTCAACCT GGAAGCCGTC GGCATGCAGG GCGATGTGCT GTCGCGCTTC GAGCACCTGG TGGCCCAGCC GCACGGCATC ATCCTGGTGA CCGGCCCGAC CGGCTCGGGC AAGACCACCA CGCTGTATGC GGCGATGGAG CGGCTCGATA CCCGGCGCCA GAACATCATG ACGGTGGAAG ACCCGATCGA GTACGAACTG GCCGGCGTCG GCCAGACGCA GGTCAACGCC AAGATCGACC TGGACTTCGC CAAGGCCCTG CGCGCCATCC TGCGCCAGGA TCCGGACGTG ATCATGATCG GCGAGATCCG CGACTTCGAA ACCGCGCAAA TCGCCATTCA GGCTTCGCTC ACAGGCCACC TGGTGCTGGC CACGCTGCAC ACCAACGACG CCGCCAGCGC CGTGACCCGG CTGACCGACA TGGGCATCGA GCCCTTCCTG CTCAGTTCGT CGCTGCTCGG CGTGCTGGCG CAGCGGCTGG TGCGCAAGGT CTGCGTGCAT TGCAAAGGCG CCGGCTGCCC GAGCTGCGGC CAGACCGGCT ACCAGGGCCG CACCGGCGTG TTCGAACTGC TGGCAACCGA CGACGCCATC CGGGCGCAGA TCCATCACCA GGCCGCCGAA GCCGACCTGC GCGAAGCAGC GCTGAAGAAC GGCATGACGC TGATGCGCGA CGACGGCGAG CGGCTGGTGC AAGCCGGCAT CACCACGCGC GAGGAACTGG TGCGGGTGAC CCGCGACTGA
|
Protein sequence | MEHPAHYPLP YAFARSQQLL LEDFGGDLTL WLHSLGTPET AGAVSEVMRK FDVQHINVEA PELLQQRISA AYSQSESSAA TVISEVESDV DLSRMMQALP AIEDLLETSD DAPIIRMLNA LLTQAVRDGA SDIHIEPYER HSSVRFRVDG SLRNVVQPNR ALHAALISRL KIMAELDIAE KRLPQDGRIS LRIGTRAVDV RVSTLPSAHG ERAVLRLLDK SGDRLNLEAV GMQGDVLSRF EHLVAQPHGI ILVTGPTGSG KTTTLYAAME RLDTRRQNIM TVEDPIEYEL AGVGQTQVNA KIDLDFAKAL RAILRQDPDV IMIGEIRDFE TAQIAIQASL TGHLVLATLH TNDAASAVTR LTDMGIEPFL LSSSLLGVLA QRLVRKVCVH CKGAGCPSCG QTGYQGRTGV FELLATDDAI RAQIHHQAAE ADLREAALKN GMTLMRDDGE RLVQAGITTR EELVRVTRD
|
| |