| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0750 |
|---|
| Symbol | rpmA |
|---|
| ID | 4689912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 795146 |
|---|
| End bp | 795403 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639833745 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_980990 |
|---|
| Protein GI | 121603661 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00233026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA AAAAAGGCGG CGGCTCTACG CGAAACGGGC GTGATTCACA GCCCAAAATG
CTGGGCGTCA AGAAATTTGG CGGCGAAGTC ATCAACGCAG GCAGCATCAT CGTGCGCCAG
CGTGGCACGC AGTTCCACCC AGGCGTCAAT GTCGGCATCG GCAAAGACCA CACCCTGTAT
GCACTGGTTG ACGGTCAAGT CTCCTTTGCC ATCAAGGGTT CGATGAACAA GCGCACTGTC
AATGTGACTG CAGCGTAA
|
|---|
| Protein sequence | MAQKKGGGST RNGRDSQPKM LGVKKFGGEV INAGSIIVRQ RGTQFHPGVN VGIGKDHTLY
ALVDGQVSFA IKGSMNKRTV NVTAA
|
|---|
| |