| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0747 |
|---|
| Symbol | |
|---|
| ID | 4687398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 792164 |
|---|
| End bp | 792676 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639833742 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_980987 |
|---|
| Protein GI | 121603658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00218251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA AGCCCGCCTC TTTATTCGCC TGTGGGCTTT TACTCAGCCT GAGCAGTGCG
GTCTGGGCGC AGTTTGCGGT CGAAGATGCT GAGTGGAAAG AATCCGAAGT CCCGCCGCCA
CCGGCTTTTG ATGTCGGCAA GCTGGTCATC TTTGAGGTGT CACCCAACTC ATCACTGGTT
TATGGGGTCG ATCCGGCGTC CATCAGCATT TCGAAAAGCG ATGGCGTGGT GCGCTATGTG
ATGGTGGCCA GCAGCGCCAG CGGCGCGCGC AACGTGATGT ATGAGGGGCT GCGCTGCTCT
ACCGGTGAAT TCAAGACCTA TGCCCGTTAT TCTCCCGAAG GGCGCTGGAG CATGGTCAGT
GATCCGGAGT GGCGCCCCCT ATTTGGCAAC ATGCCCTCCA AACATGCGCT GCGATTTGCC
CAGGCGGGAG CCTGCGACAA CGCGGCCCTG CCGCTGTCGG TGAATGCATT GGTCAGGCGG
CTGAAAAATC CAAATTTCGG GATGACGCCG TAA
|
|---|
| Protein sequence | MKFKPASLFA CGLLLSLSSA VWAQFAVEDA EWKESEVPPP PAFDVGKLVI FEVSPNSSLV
YGVDPASISI SKSDGVVRYV MVASSASGAR NVMYEGLRCS TGEFKTYARY SPEGRWSMVS
DPEWRPLFGN MPSKHALRFA QAGACDNAAL PLSVNALVRR LKNPNFGMTP
|
|---|
| |