Gene Pnap_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0746 
Symbol 
ID4686584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp791460 
End bp792167 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID639833741 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_980986 
Protein GI121603657 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00235884 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTTGACA GGGACGGTTT TCGGCCCAAT GTCGGCATCA TCTTGCTCAA CCAGAGAAGT 
CAGGTATTTT GGGGCAAACG CATCCGTACC CACTCATGGC AATTCCCGCA GGGCGGCATT
GATCGGGGCG AAAATCCCGA ACAAGCCATG TTCCGCGAGT TGCATGAAGA GGTCGGACTG
CACCCACAGC ACGTTCAGGT GCTGGCCCGT ACCCGAGACT GGTTGCGCTA TGAGGTGCCT
GACCGGTTCA TCCGCCGTGA TGCGCGTGGA CACTACAAAG GCCAGAAGCA AATCTGGTTT
TTGCTCCAAC TGGTCGGTCA CGACTGGGAT TTGAACCTGC GTGCAACCAA CCACCCCGAG
TTTGATGCCT GGCGCTGGAA CGACTATTGG GTGCCGCTCG ATGTCGTGGT GGAGTTCAAG
CGAGGCGTGT ATGAAATGGC GTTGACCGAG TTGTCGCGCT TCGTGCCGCG TTGCGAGTTC
CGCTTCGATG CGCGTCCGGA GCAGCGCAAC CGCTATTTGC GCGGCGGCCT GCACCAGCGC
GACCTGCTGG CCAATCAGTC TGGCGAGCCA GGTTCATTTC CTGCCGCAGG TGGCATTCCT
TCCTACGCCA CCAGGCCGGG CGCTCCATTC GAGTTGCCTC CCGGCGCCAC TTTTGAGCCT
GATCCGCAGA CCAGTTTTGG CGTGAATGCG CCAACGAAAA AAACATGA
 
Protein sequence
MLDRDGFRPN VGIILLNQRS QVFWGKRIRT HSWQFPQGGI DRGENPEQAM FRELHEEVGL 
HPQHVQVLAR TRDWLRYEVP DRFIRRDARG HYKGQKQIWF LLQLVGHDWD LNLRATNHPE
FDAWRWNDYW VPLDVVVEFK RGVYEMALTE LSRFVPRCEF RFDARPEQRN RYLRGGLHQR
DLLANQSGEP GSFPAAGGIP SYATRPGAPF ELPPGATFEP DPQTSFGVNA PTKKT