| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0738 |
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| Symbol | |
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| ID | 4688504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 779448 |
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| End bp | 782213 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639833733 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_980978 |
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| Protein GI | 121603649 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.687802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0603491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCA ATATCCTGAC CAAAATTTTC GGCAGCCGCA ACGACCGGCT GCTCAAAACC
TACCGTAAAA CTGTAGACCA AATCAATGCG CTGGAAACCC AGTATGAAAA GCTGGACGAC
GACCAGTTGC GCGCTAAAAC GCAGGAGTTC AAGGATCGGG TAGCCGCTGG CGAAACACTC
GACGCTCTGC TTCCCGAGGC CTTTGCCGTC GTGCGCGAAG GCAGCAAACG CATCATGAAG
ATGCGTCACT TCGACGTTCA GATGCTGGGC GGCATGTCGC TGCACAACGG CAAGATTTCA
GAAATGCGCA CGGGTGAAGG CAAGACCCTG ACCGCGACGC TGCCGGTGTA CCTCAATGCC
TTGACCGGCA AGGGCGTGCA TGTGGTCACG GTCAATGATT ACCTGGCCAG TCGTGACGCC
CGCTGGATGG GCAAGCTGTA CAACTTCCTC GGCATGAGCG TCGGCATCAA CCTGCCGAAC
ATGTCGCGCG AGGAAAAGCA GGCAGCCTAC AACGCCGACA TCACCTACGG CACCAACAAC
GAGTTTGGTT TTGATTACCT GCGCGACAAC ATGGTGTACG AAGTAGGCGA CCGGGTGCAG
CGCGGCCTGA ACTTCGCCAT CGTCGATGAG GTCGATTCGA TTTTGATTGA CGAGGCGCGC
ACGCCGCTCA TCATCAGCGG CCAGGCCGAA GACCACACCG AGATGTACCT GGCGATCAAC
AAGGTCGTGC CCTTGCTGAC GCGCCAGGAG GGCGAAGCCG ACCCGCGAAC CGGCGAGGGC
GTAACAACAC CCGGCGACTA CACCATCGAT GAAAAAACAC ACCAGGTGTT TTTGACCGAG
CAGGGCCATG AAAGCGCCGA GCGCATCCTG TTCGAGATGG GCCTGATTCC CGAAGGCGCC
ACGCTGTACG ACCCGGCCAA CATTTCGCTG ATGCATCATC TGTATGCAGC CCTGCGCGGC
AACCTGCTGT ACCACCGCGA CCAGCACTAC GTGGTGCAAG AAGGCGAAGT CGTGATCGTG
GACGAGTTCA CGGGGCGCCT GATGTCGGGC CGCCGCTGGA GCGATGGCCT GCACCAGGCG
GTTGAAGCCA AGGAAGGCGT GCAGATCCAG GCCGAAAATC AGACCCTGGC CTCGATCACC
TTCCAGAACT ATTTCCGCCT CTACAAGAAG CTGTCCGGCA TGACCGGAAC CGCCGACACC
GAAGCCTACG AATTCCAGGA AATCTACGGT TTAGAGACCA CCGTCATTCC ACCCAACCGG
GTGAGCAAAC GCGATGACCA GCTGGACCGC GTGTACAAAA CCACGCGCGA GAAATACGAA
GCGGCCATCA AGGACATTCG CGAGTGTTAT GAGCGCGGCC AGCCGGTGCT GGTCGGAACG
ACCTCCATCG AGAACTCCGA AATCATCGAC CAGTTGCTGA TCAAGGAAAA CCTGCCGCAC
CAGGTGCTCA ACGCCAAGCA GCATGCCAGA GAGGCCGACA TCGTCGCGCA GGCCGGCCGG
CTGAAGATGA TCACCATCGC CACCAACATG GCCGGGCGCG GTACCGACAT CGTGCTGGGC
GGCAATGTTG AAAAACTGAT TGAAGCGGTG GAGGCGGACG AGTCCCTCGA TACCGTTGCG
AAGGAAGCCG AAATCGCGCG CTTGCAGACC CAGTGCAAGC AGGAAAACGA GCAGGTCAAA
ACACTGGGCG GTTTGCGCAT CATTGCCACC GAGCGCCACG AGTCGCGCCG TATTGACAAT
CAGTTGCGTG GCCGTTCGGG TCGCCAGGGT GATCCCGGTT CTTCACGCTT TTACCTGAGC
CTGGACGACC CGCTGATGCG TATTTTTGCC GGTGACCGGG TCAGGTCCAT CATGGAGCGG
CTGAAGATGC CCGATGGCGA GGCGATTGAA GCCGGCATTG TCACGCGCAG CATCGAGTCG
GCCCAGCGCA AGGTCGAGGC GCGCAATTTC GATATCCGCA AGCAACTGCT TGAATACGAC
GATGTGTCCA ATGACCAGCG CAAGGTGATT TACCAGCAGC GCAACGACAT CATGGATGCC
AGCGATCTCC AGCCGCAAAT TGCCTCCTTG CGTGAGGGTT GCTTCGCTGA CCTGACGCGG
CAGTACGTCC CGGTGGAAAG CGTCGAGGAA CAATGGGATG TGGCCGGGCT TGAAAAAACA
CTCCGCGACG AGTGGCACAT CGACCTGGCC TTGCGCCAGG AAATCGAATC CGCCACGGCG
ATCACGGATG AGGAAGTGCT TGAAAAGGTC AGTGCAGCCG CGGAGGCGGC ATTTGCCGAC
AAGCTGGAAA AGATCGGCAA GGAAAATTTC ACCCAGTTCG AGCGTGTGGT GCTGCTCCAA
AGCATTGACA GCCACTGGCG TGAACACCTG AGTGCCCTGG ACTATTTGCG CCAGGGCATT
CATCTGCGTG GCTATGCCCA AAAGCAGCCC AAGCAGGAAT ACAAGCGAGA GGCGTTTGAG
TTGTTTGGCC AGCTTCTCGA CAGCGTGAAG AACGAAGTCA CCAAAACGCT GATGACGGTC
CAGGTCCAGT CGGGCGAACA ACTCGACCAG GCGGCCGAAG CCCTCGAAAG CCGGGCCGAA
AACATCACCA ACGTGACCTA CACCGCTCCC ACTGAAACGG GTGAAGTGGA AACGACGGTC
GATGAAGCCT CGCAGCGGCG TCAGCAGGCT GTTGCAGGTT CGGCCATGCC GCGCGTTGGC
CGCAATGATC CCTGCCCCTG TGGTTCGGGT AAAAAATACA AGCTCTGCCA CGGCAAGCTG
ACCTGA
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| Protein sequence | MASNILTKIF GSRNDRLLKT YRKTVDQINA LETQYEKLDD DQLRAKTQEF KDRVAAGETL
DALLPEAFAV VREGSKRIMK MRHFDVQMLG GMSLHNGKIS EMRTGEGKTL TATLPVYLNA
LTGKGVHVVT VNDYLASRDA RWMGKLYNFL GMSVGINLPN MSREEKQAAY NADITYGTNN
EFGFDYLRDN MVYEVGDRVQ RGLNFAIVDE VDSILIDEAR TPLIISGQAE DHTEMYLAIN
KVVPLLTRQE GEADPRTGEG VTTPGDYTID EKTHQVFLTE QGHESAERIL FEMGLIPEGA
TLYDPANISL MHHLYAALRG NLLYHRDQHY VVQEGEVVIV DEFTGRLMSG RRWSDGLHQA
VEAKEGVQIQ AENQTLASIT FQNYFRLYKK LSGMTGTADT EAYEFQEIYG LETTVIPPNR
VSKRDDQLDR VYKTTREKYE AAIKDIRECY ERGQPVLVGT TSIENSEIID QLLIKENLPH
QVLNAKQHAR EADIVAQAGR LKMITIATNM AGRGTDIVLG GNVEKLIEAV EADESLDTVA
KEAEIARLQT QCKQENEQVK TLGGLRIIAT ERHESRRIDN QLRGRSGRQG DPGSSRFYLS
LDDPLMRIFA GDRVRSIMER LKMPDGEAIE AGIVTRSIES AQRKVEARNF DIRKQLLEYD
DVSNDQRKVI YQQRNDIMDA SDLQPQIASL REGCFADLTR QYVPVESVEE QWDVAGLEKT
LRDEWHIDLA LRQEIESATA ITDEEVLEKV SAAAEAAFAD KLEKIGKENF TQFERVVLLQ
SIDSHWREHL SALDYLRQGI HLRGYAQKQP KQEYKREAFE LFGQLLDSVK NEVTKTLMTV
QVQSGEQLDQ AAEALESRAE NITNVTYTAP TETGEVETTV DEASQRRQQA VAGSAMPRVG
RNDPCPCGSG KKYKLCHGKL T
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