| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0735 |
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| Symbol | |
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| ID | 4686432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 775135 |
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| End bp | 777186 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639833730 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_980975 |
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| Protein GI | 121603646 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.431182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0765632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAG TGATGTATAC CCCGATGGCG GGTCGCCCGG TGCATTCGCC AGACCAGGAA
GTTCATGAGC TTGACCATCC CAATCTGATC ATGGAGTCGC ATACGCGGTC TAAAGCTTAT
GGCATAGACC GCGACGACAT ACCCGATTTT TCACCCGAAA GCCCGGCCAG GCTGGCCCAG
GGGCTGGATG AAAACAAGTT CCTGCTGGAG CATGCCATGC CCGTCATGGA AACCCTTCAT
GAACAAATTG CCAACACCCA CAACATGGTG CTGCTGACCG CGTCGAATGG CTTGGTGCTG
CACTCGCTGG GCGACATGGA TTTCCTGGAA AAGGCGATGC AGGTGGCGTT GGTGCCAGGC
GTGTGCTGGT CCGAAAAAAG CAAGGGGACC AACGCCATTG GCACCGCCTT GACAGAAGAA
CTGCCGGTGA CCATACGCGG TTCCGAGCAT TTCATGCATG CCAACCAGTT TCTGACGTGT
TCATGCGCCC CTGTTTTTGA CCCTTACGGC CAGATCATTG GTGCGCTGGA TGTGACGGGG
GATCAGCGAA ATTTTCATCA GCACACCATG GCTCTGGTGC GCATGTCGGT TCAGATGATC
GAGAACCACA TGTTCGCCGA CATTTTCCCG ACGGCAGTTC GCATTCACTT TCATACACGC
TCCGAATTCC TGGGCACCCT GGTTGAAGGC ATCGCCGTTT TCTCGCACGA GGGGCGCTTC
CTGTCCGCCA ACCGCAGCGC CCAGTTTCAG CTGGGCATGT CCTTCAATGC GCTGAAGGGT
CATACTTTTT CTTCCCTGTT TGACATTCCC ATCTCCAGGC TCCATGAACT GCGTGGCAAT
GCCCTGACCA AACCCCAGCA GTTTGTTCTG CACAACGGGG TGTCGGTCTG GTGCAGAATT
AAAATGAAAC CGCTGAGCCT GTGGTCGGAC GGGCAAGCGA TCAACACGGC AGCGAGCAAC
CCGTTCAAAC CACCAGAAGC TAAAAATTAT GCAGGCATGG CCCCGGCAGC GGAAACAGGC
TTTAGCCCTG CGCGCAAAGT ACAACTCTCC ACTTTGCACT ACCTGAACAC CGGCGACCCC
CAGGTGGCCA CCGTCATCCA GAAACTGAGC ATGGTGCGTG GCCGTGACAT TCCGATCATG
ATTCTGGGAG AAACCGGGAC TGGCAAGGAC TTGCTGGCCC AGGCCATTCA CGGCGATTCC
GACCGGGCCG GCCATCCTTT CGTGTCAGTC AACTGCGCCT CCATTCCCGA GACGCTGATC
GAATCAGAAT TGTTTGGCTA CGAAGAAGGC GCTTTTACCG GAGCCAAGAA AAAAGGCGCC
ACCGGAAAAA TCCAGCAAGC CAACGGCGGT ACGCTTTTTC TCGATGAGAT TGGCGACATG
CCCAGGCACC TGCAGGCACG GTTGCTGCGC GTGCTGCAAG ATAAAAAAGT CAGTCCTCTG
GGCGCAGGCA GGGAGGTGGA GGTGGACGTG GCCGTGATTT GCGCCACCAA CAAGAACCTG
AAGGAAATGA TCGTCCGGGG AGAGTTTCGC GAGGATCTGT ACTATCGCCT CAATGGCCTG
GTGGTTCGGC TGCCCGCCTT GCGCCATCGC ACCGACTTTG AAGTCGTCAT GCAGAAAATC
CTGAAAAGCT TGTGCGAAAA CGGCGCCCAG ATTGGCATTT CGGCCGATGT GATGACCCTG
TTCCATACGC ACCAATGGCC TGGAAACTTC AGGCAGTTGC ACAACCTGTT GCGCACGGCA
GTGGTCATGG TCGGCTGCGA AGGTGTGATA CAGCGCAACC ACTTGCCCGA CGATTTTCTC
GAAGAGCATG AACATGTGCT GCAAGCGGTT GCACAACCTT CACCTTCTTC TGCAGCCGCT
CCGGAAAATG CAATGCCGAA CATGCCAGGC GATACCGATG GGCAGCGGCT GCAAGATGTG
GCCTTGGTGG CCATGACCAA GATGCTGCAA CACCACAAGG GCAATGTGTC GGCGGCGGCC
AAGGCGCTGG GCGTGTCCCG CAACACGGTG TACCGCCGCA AGGAACAGCT ACCGCCCGAC
GTCTGGAACT GA
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| Protein sequence | MRTVMYTPMA GRPVHSPDQE VHELDHPNLI MESHTRSKAY GIDRDDIPDF SPESPARLAQ
GLDENKFLLE HAMPVMETLH EQIANTHNMV LLTASNGLVL HSLGDMDFLE KAMQVALVPG
VCWSEKSKGT NAIGTALTEE LPVTIRGSEH FMHANQFLTC SCAPVFDPYG QIIGALDVTG
DQRNFHQHTM ALVRMSVQMI ENHMFADIFP TAVRIHFHTR SEFLGTLVEG IAVFSHEGRF
LSANRSAQFQ LGMSFNALKG HTFSSLFDIP ISRLHELRGN ALTKPQQFVL HNGVSVWCRI
KMKPLSLWSD GQAINTAASN PFKPPEAKNY AGMAPAAETG FSPARKVQLS TLHYLNTGDP
QVATVIQKLS MVRGRDIPIM ILGETGTGKD LLAQAIHGDS DRAGHPFVSV NCASIPETLI
ESELFGYEEG AFTGAKKKGA TGKIQQANGG TLFLDEIGDM PRHLQARLLR VLQDKKVSPL
GAGREVEVDV AVICATNKNL KEMIVRGEFR EDLYYRLNGL VVRLPALRHR TDFEVVMQKI
LKSLCENGAQ IGISADVMTL FHTHQWPGNF RQLHNLLRTA VVMVGCEGVI QRNHLPDDFL
EEHEHVLQAV AQPSPSSAAA PENAMPNMPG DTDGQRLQDV ALVAMTKMLQ HHKGNVSAAA
KALGVSRNTV YRRKEQLPPD VWN
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