Gene Pnap_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0732 
Symbol 
ID4687758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp771798 
End bp772715 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID639833727 
Productpyrroloquinoline quinone biosynthesis protein PqqB 
Protein accessionYP_980972 
Protein GI121603643 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID[TIGR02108] coenzyme PQQ biosynthesis protein B 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.115489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0583771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC GAGTTTTAGG TTCCTCCGCC GGCGGCGGCT TTCCCCAGTG GAATTGCAAC 
TGCCCCAACT GCGACGGCCT GCGTCGCGGC AGCATTCGGG CCCAGGCCAG AACGCAGTCG
TCCATTGCCG TGACCGTCGA TGGCACTGAC TGGCTGCTGG TCAATGCTTC GCCGGATGTG
CTGACCCAGA TTCGGGCCGC CCCCGAGTTG CAGCCCGCAC GCGCCCAGCG CGACAGCGGC
ATTGCCGCCG TGCTGCTGAT GGACGCCCAG ATCGATCATG TCACCGGCCT GCTGATGCTT
CGCGAGCGGC AAAGCCCCTT GCCGCTGCTG GCAACGCCCG AGGTGCTTGG CGACCTGACC
GAAGGCTTTC CCATCACCCG GATTCTGTCG CACTACTGCG GCGTCACGCC GACTCCCTTG
CGCCTGGATG GCGATTTCAT GGCAGTGCCC GAGCTGCCGG GCATGGCGAT ACGGCCGGTT
CTTTTGTCCT CCAAGCCGCC GCCTTATTCG CCTTTTCGGA ATTGTCCGCG ACCGGGCGAC
AACATCGGTT TGCTGCTGGA GAACCCGGCC ACCGGGCAAC GCGTGTTTTA CGCGCCCGGC
CTGGGGGAAA TGACGCCCGC GCTGCTGGAC CTGATGGCCC AGTGCAGCGT GGTGCTGGTG
GACGGCACCT TCTGGACCGA AGACGAAATG CAGCGCCTGG GCCTGTCGAA AAAAAGCGCC
GCCGAGATGG GGCATTTGCC GCAAAGCGGA CCGCAGGGCA TGATTGCCCA GCTCGACACC
CTGCCGGCCG CGACCCGAAA AATCCTCATC CACATCAACA ACACCAACCC CATCCTGCGC
GAAGACTCCC CGGAGCGTGC CCTGCTGACC GCGCATGGCA TTGAAGTCGC GTTCGACGGC
ATGGACATCG TGTTTTAG
 
Protein sequence
MRIRVLGSSA GGGFPQWNCN CPNCDGLRRG SIRAQARTQS SIAVTVDGTD WLLVNASPDV 
LTQIRAAPEL QPARAQRDSG IAAVLLMDAQ IDHVTGLLML RERQSPLPLL ATPEVLGDLT
EGFPITRILS HYCGVTPTPL RLDGDFMAVP ELPGMAIRPV LLSSKPPPYS PFRNCPRPGD
NIGLLLENPA TGQRVFYAPG LGEMTPALLD LMAQCSVVLV DGTFWTEDEM QRLGLSKKSA
AEMGHLPQSG PQGMIAQLDT LPAATRKILI HINNTNPILR EDSPERALLT AHGIEVAFDG
MDIVF