Gene Pnap_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0728 
Symbol 
ID4687287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp769231 
End bp769563 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content54% 
IMG OID639833723 
Productcytochrome c, class I 
Protein accessionYP_980968 
Protein GI121603639 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0783308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA ACATCCTTTC CTGTGCATTT GTGCTGGCAG CCTCAGGCAT GAGCGGCGTT 
CATGCTGAAG ATACCGCAGC CATGACCGAC TTTGTTCGTG GCAACGGCTG CTTTTCATGC
CATTCGGCCA CCGAAAAAAT CGTTGGCCCC TCTTTTCAGA GCATCAGCAG CAAATACGCT
GCTGACAAGG ACGCCGTCCC CACCCTGGCT CAAAGCATCA AGAACGGCTC GACCGGAAAA
TGGGGCTCGC GCGTTGCCAT GCCGCCGCAT CAAAACATCA GCAATGAAGA TTTGACCAAG
CTGGCCAAAT GGGTGCTTTC CCAGAAACCT TGA
 
Protein sequence
MKLNILSCAF VLAASGMSGV HAEDTAAMTD FVRGNGCFSC HSATEKIVGP SFQSISSKYA 
ADKDAVPTLA QSIKNGSTGK WGSRVAMPPH QNISNEDLTK LAKWVLSQKP